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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033308.1-P Field mustard nucleus 100.0 100.0
CDY15225 Canola nucleus 75.76 75.19
CDY15221 Canola cytosol, nucleus, peroxisome 56.57 52.71
CDY15220 Canola nucleus 24.75 48.51
CDX89993 Canola nucleus 56.31 47.75
CDY15223 Canola nucleus 25.25 47.17
CDY55326 Canola nucleus 28.79 47.11
AT1G02250.1 Thale cress nucleus 41.92 45.86
CDY32450 Canola nucleus 25.25 44.64
AT1G02230.1 Thale cress nucleus 40.4 44.57
CDX89994 Canola nucleus 28.03 44.22
CDY32449 Canola nucleus 24.49 43.3
CDY11741 Canola nucleus 15.15 43.17
CDX89995 Canola nucleus 38.38 42.82
CDY55325 Canola nucleus 26.77 41.73
CDX89991 Canola nucleus 28.28 41.64
CDX90132 Canola nucleus 12.88 41.46
AT3G04420.1 Thale cress nucleus 35.61 41.23
CDY15218 Canola nucleus 36.36 39.45
AT1G02220.1 Thale cress nucleus 37.12 37.31
CDY15224 Canola cytosol 31.82 33.69
CDY15210 Canola cytosol, nucleus, plastid 19.44 29.73
CDY15214 Canola nucleus 20.96 28.04
CDY59815 Canola cytosol 16.92 25.09
CDY07138 Canola nucleus 17.68 24.31
CDY07135 Canola nucleus 21.46 22.91
CDX97252 Canola cytosol 24.24 22.48
CDY59814 Canola cytosol 23.48 21.88
CDY15215 Canola nucleus 22.47 20.94
CDX89996 Canola nucleus 13.64 20.93
CDY15212 Canola nucleus 22.22 20.71
KRH06324 Soybean cytosol 13.89 20.6
CDY07136 Canola cytosol 21.97 20.42
KRH47750 Soybean cytosol 14.9 19.16
CDY01928 Canola cytosol, nucleus, vacuole 23.48 19.14
CDY15217 Canola nucleus 16.41 18.62
CDX89999 Canola nucleus 22.22 18.53
Os06t0101800-01 Rice nucleus 16.67 18.38
KRH47748 Soybean cytosol 18.43 18.02
CDY59812 Canola cytosol 20.45 17.96
KRH06327 Soybean cytosol 17.17 17.0
KRH06326 Soybean nucleus 18.43 16.94
HORVU7Hr1G000910.1 Barley nucleus 18.43 13.77
TraesCS4A01G499900.1 Wheat plastid 19.19 13.19
TraesCS7A01G000300.1 Wheat nucleus 17.17 12.88
TraesCS7D01G000200.1 Wheat plastid 16.67 11.76
KRH47747 Soybean nucleus 14.65 11.67
EER87676 Sorghum plastid 18.69 11.47
Zm00001d045617_P001 Maize nucleus, plasma membrane, vacuole 16.67 10.8
CDY07137 Canola extracellular, plasma membrane 6.31 7.96
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:A0A078DLA9EnsemblPlants:CDX89990ProteinID:CDX89990ProteinID:CDX89990.1
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00150485001InterPro:IPR003441
InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005PANTHER:PTHR31989
PANTHER:PTHR31989:SF58SUPFAM:SSF101941UniParc:UPI0002544F6DSEG:seg::
Description
BnaA10g00920D
Coordinates
chrLK031861:+:1112235..1113861
Molecular Weight (calculated)
44855.4 Da
IEP (calculated)
5.660
GRAVY (calculated)
-0.783
Length
396 amino acids
Sequence
(BLAST)
001: MVDPPVGYRF HPTDEEIVGD YVRPKNIESN TSRVDEVMNT VDIYEFDPWE LPYKSRINST DEVWYFFGCK KDQQNRGERQ SRRTKSGFWK KTGVTMDIMR
101: KRGNREKIGE KRVFVFQYSK ILGGPSKPKS DWVMHEHVAT FLSPDSPNQT MMMMKYTVCK VMFKGDERVL SSSSSSSAGQ IQHHHLSLIP HVNSNNSGGL
201: SSETEVDPRQ FTGFPHLEEE TMFVDEILRG FNNPPTDDWN SLFSNDEEQG NTMFMQEDRN DYRPKMSLTG VFIGHSDDDS DSDSISSRTT TGSIKTSSTC
301: VTFGCSNHPT DLSESPSSST IESGSVTQEV SEALGTNTVT SERKMNPCDD DAQLSEIGGD KIDQEMVIKN KRAGYIYRMM QKITKKIKLR SCISGT
Best Arabidopsis Sequence Match ( AT1G02250.1 )
(BLAST)
001: MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT
Arabidopsis Description
NAC005NAC domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O81914]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.