Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra033308.1-P | Field mustard | nucleus | 100.0 | 100.0 |
CDY15225 | Canola | nucleus | 75.76 | 75.19 |
CDY15221 | Canola | cytosol, nucleus, peroxisome | 56.57 | 52.71 |
CDY15220 | Canola | nucleus | 24.75 | 48.51 |
CDX89993 | Canola | nucleus | 56.31 | 47.75 |
CDY15223 | Canola | nucleus | 25.25 | 47.17 |
CDY55326 | Canola | nucleus | 28.79 | 47.11 |
AT1G02250.1 | Thale cress | nucleus | 41.92 | 45.86 |
CDY32450 | Canola | nucleus | 25.25 | 44.64 |
AT1G02230.1 | Thale cress | nucleus | 40.4 | 44.57 |
CDX89994 | Canola | nucleus | 28.03 | 44.22 |
CDY32449 | Canola | nucleus | 24.49 | 43.3 |
CDY11741 | Canola | nucleus | 15.15 | 43.17 |
CDX89995 | Canola | nucleus | 38.38 | 42.82 |
CDY55325 | Canola | nucleus | 26.77 | 41.73 |
CDX89991 | Canola | nucleus | 28.28 | 41.64 |
CDX90132 | Canola | nucleus | 12.88 | 41.46 |
AT3G04420.1 | Thale cress | nucleus | 35.61 | 41.23 |
CDY15218 | Canola | nucleus | 36.36 | 39.45 |
AT1G02220.1 | Thale cress | nucleus | 37.12 | 37.31 |
CDY15224 | Canola | cytosol | 31.82 | 33.69 |
CDY15210 | Canola | cytosol, nucleus, plastid | 19.44 | 29.73 |
CDY15214 | Canola | nucleus | 20.96 | 28.04 |
CDY59815 | Canola | cytosol | 16.92 | 25.09 |
CDY07138 | Canola | nucleus | 17.68 | 24.31 |
CDY07135 | Canola | nucleus | 21.46 | 22.91 |
CDX97252 | Canola | cytosol | 24.24 | 22.48 |
CDY59814 | Canola | cytosol | 23.48 | 21.88 |
CDY15215 | Canola | nucleus | 22.47 | 20.94 |
CDX89996 | Canola | nucleus | 13.64 | 20.93 |
CDY15212 | Canola | nucleus | 22.22 | 20.71 |
KRH06324 | Soybean | cytosol | 13.89 | 20.6 |
CDY07136 | Canola | cytosol | 21.97 | 20.42 |
KRH47750 | Soybean | cytosol | 14.9 | 19.16 |
CDY01928 | Canola | cytosol, nucleus, vacuole | 23.48 | 19.14 |
CDY15217 | Canola | nucleus | 16.41 | 18.62 |
CDX89999 | Canola | nucleus | 22.22 | 18.53 |
Os06t0101800-01 | Rice | nucleus | 16.67 | 18.38 |
KRH47748 | Soybean | cytosol | 18.43 | 18.02 |
CDY59812 | Canola | cytosol | 20.45 | 17.96 |
KRH06327 | Soybean | cytosol | 17.17 | 17.0 |
KRH06326 | Soybean | nucleus | 18.43 | 16.94 |
HORVU7Hr1G000910.1 | Barley | nucleus | 18.43 | 13.77 |
TraesCS4A01G499900.1 | Wheat | plastid | 19.19 | 13.19 |
TraesCS7A01G000300.1 | Wheat | nucleus | 17.17 | 12.88 |
TraesCS7D01G000200.1 | Wheat | plastid | 16.67 | 11.76 |
KRH47747 | Soybean | nucleus | 14.65 | 11.67 |
EER87676 | Sorghum | plastid | 18.69 | 11.47 |
Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 16.67 | 10.8 |
CDY07137 | Canola | extracellular, plasma membrane | 6.31 | 7.96 |
Protein Annotations
MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DLA9 | EnsemblPlants:CDX89990 | ProteinID:CDX89990 | ProteinID:CDX89990.1 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00150485001 | InterPro:IPR003441 |
InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
PANTHER:PTHR31989:SF58 | SUPFAM:SSF101941 | UniParc:UPI0002544F6D | SEG:seg | : | : |
Description
BnaA10g00920D
Coordinates
chrLK031861:+:1112235..1113861
Molecular Weight (calculated)
44855.4 Da
IEP (calculated)
5.660
GRAVY (calculated)
-0.783
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDPPVGYRF HPTDEEIVGD YVRPKNIESN TSRVDEVMNT VDIYEFDPWE LPYKSRINST DEVWYFFGCK KDQQNRGERQ SRRTKSGFWK KTGVTMDIMR
101: KRGNREKIGE KRVFVFQYSK ILGGPSKPKS DWVMHEHVAT FLSPDSPNQT MMMMKYTVCK VMFKGDERVL SSSSSSSAGQ IQHHHLSLIP HVNSNNSGGL
201: SSETEVDPRQ FTGFPHLEEE TMFVDEILRG FNNPPTDDWN SLFSNDEEQG NTMFMQEDRN DYRPKMSLTG VFIGHSDDDS DSDSISSRTT TGSIKTSSTC
301: VTFGCSNHPT DLSESPSSST IESGSVTQEV SEALGTNTVT SERKMNPCDD DAQLSEIGGD KIDQEMVIKN KRAGYIYRMM QKITKKIKLR SCISGT
101: KRGNREKIGE KRVFVFQYSK ILGGPSKPKS DWVMHEHVAT FLSPDSPNQT MMMMKYTVCK VMFKGDERVL SSSSSSSAGQ IQHHHLSLIP HVNSNNSGGL
201: SSETEVDPRQ FTGFPHLEEE TMFVDEILRG FNNPPTDDWN SLFSNDEEQG NTMFMQEDRN DYRPKMSLTG VFIGHSDDDS DSDSISSRTT TGSIKTSSTC
301: VTFGCSNHPT DLSESPSSST IESGSVTQEV SEALGTNTVT SERKMNPCDD DAQLSEIGGD KIDQEMVIKN KRAGYIYRMM QKITKKIKLR SCISGT
001: MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT
Arabidopsis Description
NAC005NAC domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O81914]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.