Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89994 | Canola | nucleus | 84.65 | 68.13 |
| CDY55326 | Canola | nucleus | 60.89 | 50.83 |
| CDY15223 | Canola | nucleus | 46.53 | 44.34 |
| CDY55325 | Canola | nucleus | 53.96 | 42.91 |
| CDY32450 | Canola | nucleus | 47.52 | 42.86 |
| CDY32449 | Canola | nucleus | 47.03 | 42.41 |
| CDY11741 | Canola | nucleus | 28.71 | 41.73 |
| CDX90132 | Canola | nucleus | 24.75 | 40.65 |
| CDX89991 | Canola | nucleus | 48.02 | 36.06 |
| AT1G02250.1 | Thale cress | nucleus | 55.45 | 30.94 |
| CDX89995 | Canola | nucleus | 52.97 | 30.14 |
| AT1G02230.1 | Thale cress | nucleus | 50.0 | 28.13 |
| AT3G04420.1 | Thale cress | nucleus | 44.06 | 26.02 |
| CDY15218 | Canola | nucleus | 45.05 | 24.93 |
| CDX89990 | Canola | nucleus | 48.51 | 24.75 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 31.68 | 24.71 |
| CDY15224 | Canola | cytosol | 43.07 | 23.26 |
| CDY15214 | Canola | nucleus | 33.66 | 22.97 |
| KRH06324 | Soybean | cytosol | 29.7 | 22.47 |
| AT1G02220.1 | Thale cress | nucleus | 42.08 | 21.57 |
| CDY59815 | Canola | cytosol | 27.72 | 20.97 |
| CDY15225 | Canola | nucleus | 41.09 | 20.8 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 42.57 | 20.24 |
| CDY07138 | Canola | nucleus | 27.72 | 19.44 |
| KRH47750 | Soybean | cytosol | 28.71 | 18.83 |
| CDX89993 | Canola | nucleus | 43.07 | 18.63 |
| CDY07135 | Canola | nucleus | 33.66 | 18.33 |
| CDX89996 | Canola | nucleus | 22.77 | 17.83 |
| CDY15215 | Canola | nucleus | 33.66 | 16.0 |
| Os06t0101800-01 | Rice | nucleus | 27.72 | 15.6 |
| CDY59814 | Canola | cytosol | 32.67 | 15.53 |
| CDY07136 | Canola | cytosol | 32.67 | 15.49 |
| CDX97252 | Canola | cytosol | 32.67 | 15.46 |
| CDY15212 | Canola | nucleus | 31.68 | 15.06 |
| KRH06327 | Soybean | cytosol | 29.7 | 15.0 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 35.15 | 14.61 |
| CDY59812 | Canola | cytosol | 32.18 | 14.41 |
| KRH47748 | Soybean | cytosol | 28.71 | 14.32 |
| CDX89999 | Canola | nucleus | 33.66 | 14.32 |
| CDY15217 | Canola | nucleus | 23.27 | 13.47 |
| KRH06326 | Soybean | nucleus | 27.72 | 12.99 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 29.7 | 11.32 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 29.21 | 11.17 |
| KRH47747 | Soybean | nucleus | 26.73 | 10.87 |
| TraesCS4A01G499900.1 | Wheat | plastid | 30.69 | 10.76 |
| TraesCS7D01G000200.1 | Wheat | plastid | 28.22 | 10.16 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 26.73 | 8.84 |
| EER87676 | Sorghum | plastid | 27.72 | 8.68 |
| CDY07137 | Canola | extracellular, plasma membrane | 8.91 | 5.73 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FLA1 | UniProt:A0A078FLA1 | EnsemblPlants:CDY15220 | ProteinID:CDY15220 |
| ProteinID:CDY15220.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00085413001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF57 | SUPFAM:SSF101941 | UniParc:UPI0004EDB4C3 | : | : | : |
Description
BnaC05g00990DBnaC05g00990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLA1]
Coordinates
chrLK032052:-:533788..534839
Molecular Weight (calculated)
23622.8 Da
IEP (calculated)
9.021
GRAVY (calculated)
-0.905
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNPVGLRFL PTEEEIVDHY LRLKNHGGSN TSHVDQVIST INICNFDPWE LPRQSRMESK DQVWYFFGRK EKRYNRGERQ IRKTKSGFWK KTGVTMDIKR
101: KRSGHREKIG EKRVLVFHSS GSKTNWIMHE YDAACLSPTQ EPKNPHQLSG FFDKKQETEL EEAIQGAFDN LSSYDWKYLL GDDEQSKTVS MQNSLTGVFD
201: WA
101: KRSGHREKIG EKRVLVFHSS GSKTNWIMHE YDAACLSPTQ EPKNPHQLSG FFDKKQETEL EEAIQGAFDN LSSYDWKYLL GDDEQSKTVS MQNSLTGVFD
201: WA
001: MMNPVGFRFR PNDEEIVDHY LRPKNLDSDT SHVDEVISTV DICSFEPWDL PSKSMIKSRD GVWYFFSVKE MKYNRGDQQR RRTNSGFWKK TGKTMTVMRK
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
Arabidopsis Description
NAC004NAC domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81913]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.