Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32449 | Canola | nucleus | 69.69 | 79.02 |
| CDY32450 | Canola | nucleus | 64.17 | 72.77 |
| CDY55326 | Canola | nucleus | 58.27 | 61.16 |
| CDY15220 | Canola | nucleus | 42.91 | 53.96 |
| CDX89994 | Canola | nucleus | 48.82 | 49.4 |
| CDY15223 | Canola | nucleus | 37.4 | 44.81 |
| CDY11741 | Canola | nucleus | 22.05 | 40.29 |
| CDX89991 | Canola | nucleus | 40.94 | 38.66 |
| CDX90132 | Canola | nucleus | 18.11 | 37.4 |
| AT1G02250.1 | Thale cress | nucleus | 44.49 | 31.22 |
| AT3G04420.1 | Thale cress | nucleus | 41.34 | 30.7 |
| AT1G02230.1 | Thale cress | nucleus | 42.91 | 30.36 |
| CDX89995 | Canola | nucleus | 41.73 | 29.86 |
| CDY15218 | Canola | nucleus | 40.94 | 28.49 |
| CDY59815 | Canola | cytosol | 28.74 | 27.34 |
| CDX89990 | Canola | nucleus | 41.73 | 26.77 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 26.77 | 26.25 |
| CDY15224 | Canola | cytosol | 38.19 | 25.94 |
| CDY15214 | Canola | nucleus | 29.53 | 25.34 |
| CDY07138 | Canola | nucleus | 27.95 | 24.65 |
| KRH06324 | Soybean | cytosol | 25.2 | 23.97 |
| AT1G02220.1 | Thale cress | nucleus | 36.22 | 23.35 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 38.98 | 23.29 |
| CDY15225 | Canola | nucleus | 35.83 | 22.81 |
| CDX89996 | Canola | nucleus | 21.65 | 21.32 |
| CDX89993 | Canola | nucleus | 38.19 | 20.77 |
| CDY07135 | Canola | nucleus | 28.35 | 19.41 |
| CDY15215 | Canola | nucleus | 32.28 | 19.29 |
| KRH47750 | Soybean | cytosol | 22.83 | 18.83 |
| Os06t0101800-01 | Rice | nucleus | 25.2 | 17.83 |
| CDX97252 | Canola | cytosol | 29.53 | 17.56 |
| CDX89999 | Canola | nucleus | 32.68 | 17.47 |
| CDY15212 | Canola | nucleus | 27.95 | 16.71 |
| CDY15217 | Canola | nucleus | 22.44 | 16.33 |
| CDY59814 | Canola | cytosol | 27.17 | 16.24 |
| CDY59812 | Canola | cytosol | 28.74 | 16.19 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 30.32 | 15.84 |
| CDY07136 | Canola | cytosol | 25.59 | 15.26 |
| KRH47748 | Soybean | cytosol | 23.62 | 14.81 |
| KRH06327 | Soybean | cytosol | 22.83 | 14.5 |
| KRH06326 | Soybean | nucleus | 24.41 | 14.39 |
| KRH47747 | Soybean | nucleus | 25.59 | 13.08 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 25.98 | 12.5 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 25.2 | 12.08 |
| TraesCS7D01G000200.1 | Wheat | plastid | 25.98 | 11.76 |
| TraesCS4A01G499900.1 | Wheat | plastid | 26.38 | 11.63 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 26.77 | 11.13 |
| EER87676 | Sorghum | plastid | 27.95 | 11.01 |
| CDY07137 | Canola | extracellular, plasma membrane | 10.63 | 8.6 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078IY98 | UniProt:A0A078IY98 | EnsemblPlants:CDY55325 | ProteinID:CDY55325 |
| ProteinID:CDY55325.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00016676001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF57 | SUPFAM:SSF101941 | UniParc:UPI0004EEF86B | SEG:seg | : | : |
Description
BnaC08g49760DBnaC08g49760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IY98]
Coordinates
chrLK033393:+:38974..40082
Molecular Weight (calculated)
28550.0 Da
IEP (calculated)
5.900
GRAVY (calculated)
-0.800
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNNMVGFRF RPTDVELVEH YLRPKNNGGG STTSSQVDQV INTVDICNLD PWELPPLSRI ASSDQVWYFF GRKESRYNRG ERQKRKTKSG YWKKTGNTLP
101: ITRKRGNHET IGEKRVLMFY MSGSRSNWVM HEYHASCLSP NDSGAYTICK VQFKGEASEI SSSSGVDHVV HSHSLPTPMN NPGGSEGLEN SSSVLDNQQA
201: MQFEAETQMA FDILPSYDWK SLLDDDDADE QNKTASMPSQ RPVSSLVTYS SDDD
101: ITRKRGNHET IGEKRVLMFY MSGSRSNWVM HEYHASCLSP NDSGAYTICK VQFKGEASEI SSSSGVDHVV HSHSLPTPMN NPGGSEGLEN SSSVLDNQQA
201: MQFEAETQMA FDILPSYDWK SLLDDDDADE QNKTASMPSQ RPVSSLVTYS SDDD
001: MENPVGLRFR PTDKEIVVDY LRPKNSDRDT SHVDRVISTV TIRSFDPWEL PCQSRIKLKD ESWCFFSPKE NKYGRGDQQI RKTKSGYWKI TGKPKPILRN
101: RQEIGEKKVL MFYMSKELGG SKSDWVMHEY HAFSPTQMMM TYTICKVMFK GDVREISSSS ASYGSEIEQS RDSLIPLLVN DSEEEAQIED AIPIEEWETW
201: LTDDGVDEQV NHIMNMKDDR NNHRPQKPLT GVLIDDSSDD DDDSDLLSPT TNSIENSSTC DSFGSSDQIN LVSLTQEVSQ ALITSIDTPE KIKSPYDDAQ
301: GTGAGGQKLG QETREKKRAG FFHRMIQIFV KKIHQCSSIS RT
101: RQEIGEKKVL MFYMSKELGG SKSDWVMHEY HAFSPTQMMM TYTICKVMFK GDVREISSSS ASYGSEIEQS RDSLIPLLVN DSEEEAQIED AIPIEEWETW
201: LTDDGVDEQV NHIMNMKDDR NNHRPQKPLT GVLIDDSSDD DDDSDLLSPT TNSIENSSTC DSFGSSDQIN LVSLTQEVSQ ALITSIDTPE KIKSPYDDAQ
301: GTGAGGQKLG QETREKKRAG FFHRMIQIFV KKIHQCSSIS RT
Arabidopsis Description
anac048At3g04420/T27C4_6 [Source:UniProtKB/TrEMBL;Acc:Q8W4R4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.