Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04430.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT3G04430.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT3G04430.1 | CDY23174 | AT3G51920.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033297.1-P | Field mustard | nucleus | 48.14 | 74.67 |
| CDX89996 | Canola | nucleus | 54.44 | 73.64 |
| AT3G04430.1 | Thale cress | nucleus | 33.52 | 59.09 |
| CDY55326 | Canola | nucleus | 16.33 | 23.55 |
| CDY15220 | Canola | nucleus | 13.47 | 23.27 |
| CDY32450 | Canola | nucleus | 14.9 | 23.21 |
| CDY32449 | Canola | nucleus | 14.9 | 23.21 |
| KRH06324 | Soybean | cytosol | 17.48 | 22.85 |
| CDY59815 | Canola | cytosol | 17.19 | 22.47 |
| CDY55325 | Canola | nucleus | 16.33 | 22.44 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 16.62 | 22.39 |
| CDY15214 | Canola | nucleus | 18.62 | 21.96 |
| CDY11741 | Canola | nucleus | 8.6 | 21.58 |
| CDX89994 | Canola | nucleus | 15.47 | 21.51 |
| CDY15223 | Canola | nucleus | 12.89 | 21.23 |
| CDY07138 | Canola | nucleus | 17.48 | 21.18 |
| CDX90132 | Canola | nucleus | 6.88 | 19.51 |
| KRH47750 | Soybean | cytosol | 17.19 | 19.48 |
| CDY07135 | Canola | nucleus | 20.34 | 19.14 |
| CDX89991 | Canola | nucleus | 13.75 | 17.84 |
| Os06t0101800-01 | Rice | nucleus | 18.05 | 17.55 |
| CDX97252 | Canola | cytosol | 21.2 | 17.33 |
| CDY07136 | Canola | cytosol | 20.92 | 17.14 |
| CDY59814 | Canola | cytosol | 20.34 | 16.71 |
| CDX89990 | Canola | nucleus | 18.62 | 16.41 |
| CDX89995 | Canola | nucleus | 16.62 | 16.34 |
| CDY15225 | Canola | nucleus | 18.05 | 15.79 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 21.78 | 15.64 |
| CDY59812 | Canola | cytosol | 20.06 | 15.52 |
| KRH06327 | Soybean | cytosol | 17.77 | 15.5 |
| KRH47748 | Soybean | cytosol | 17.77 | 15.31 |
| CDY15224 | Canola | cytosol | 16.05 | 14.97 |
| CDY15218 | Canola | nucleus | 15.47 | 14.79 |
| KRH06326 | Soybean | nucleus | 17.19 | 13.92 |
| CDY15212 | Canola | nucleus | 16.62 | 13.65 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 20.63 | 13.64 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 20.63 | 13.58 |
| CDX89993 | Canola | nucleus | 18.05 | 13.49 |
| CDX89999 | Canola | nucleus | 18.34 | 13.47 |
| CDY15215 | Canola | nucleus | 16.33 | 13.41 |
| KRH47747 | Soybean | nucleus | 18.91 | 13.28 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 16.05 | 13.18 |
| TraesCS7D01G000200.1 | Wheat | plastid | 20.34 | 12.66 |
| TraesCS4A01G499900.1 | Wheat | plastid | 20.34 | 12.33 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 19.48 | 11.13 |
| EER87676 | Sorghum | plastid | 19.77 | 10.7 |
| CDY07137 | Canola | extracellular, plasma membrane | 7.74 | 8.6 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FQS7 | UniProt:A0A078FQS7 | EnsemblPlants:CDY15217 | ProteinID:CDY15217 |
| ProteinID:CDY15217.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00085409001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF7 | SUPFAM:SSF101941 | UniParc:UPI0004EF085E | SEG:seg | : | : |
Description
BnaC05g00960DBnaC05g00960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQS7]
Coordinates
chrLK032052:+:522702..525668
Molecular Weight (calculated)
39862.7 Da
IEP (calculated)
7.859
GRAVY (calculated)
-0.733
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKYTFNPPE DELINYYLNN KITENDDPEG KQINEVNICH HEPADLPGLA KIESGHTWYF ISPVKKFGKL NRRKRASKTG HWKITGNSCT IKDTDGNPIG
101: LKKFLVFQEN KNRRSSTLLP TTAHQHKFTW IIHEFHSFLH HPNKDAFVLC KLKKKTRSRS GVAVDASPAV TDLSPTIISD PILNDSLMLT HHKDPVEDYG
201: GDYCNDLEEL TPELDSSRWL DHSYQFDSNH WGSFADTTHA ESPIRETLET KRGAAASSHD ITPFKPPPVN QPSIHRNTPV LISFTPSSPQ TPSTHVFPLS
301: ESINRHFEIS SASLHHREES FSRNITLYHR RASIVLRREL IHRIQPETS
101: LKKFLVFQEN KNRRSSTLLP TTAHQHKFTW IIHEFHSFLH HPNKDAFVLC KLKKKTRSRS GVAVDASPAV TDLSPTIISD PILNDSLMLT HHKDPVEDYG
201: GDYCNDLEEL TPELDSSRWL DHSYQFDSNH WGSFADTTHA ESPIRETLET KRGAAASSHD ITPFKPPPVN QPSIHRNTPV LISFTPSSPQ TPSTHVFPLS
301: ESINRHFEIS SASLHHREES FSRNITLYHR RASIVLRREL IHRIQPETS
001: MYRCTFNPPE EELINYYLNN KITENDDLVG KQIAEVNILH HEPADLPGLA KIESSHTWYF ISPVEKFGKL NRTKRVSRSG HWKITGNSRT IKDVDGNPIG
101: LKKFLVFQEN KRSSSSSLST TTTQQQKTNW IIHEFHSFLP HPNKMLTENK NEDYGGDYCN GLDELLQSLE QGESSGLLFG ENGHACEQDT AENSNVTM
101: LKKFLVFQEN KRSSSSSLST TTTQQQKTNW IIHEFHSFLP HPNKMLTENK NEDYGGDYCN GLDELLQSLE QGESSGLLFG ENGHACEQDT AENSNVTM
Arabidopsis Description
anac049NAC domain containing protein 49 [Source:UniProtKB/TrEMBL;Acc:Q9M844]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.