Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033302.1-P | Field mustard | nucleus | 81.41 | 84.23 |
| CDY15223 | Canola | nucleus | 57.99 | 73.58 |
| Bra033305.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 75.84 | 72.34 |
| CDY15220 | Canola | nucleus | 36.06 | 48.02 |
| CDY55326 | Canola | nucleus | 40.15 | 44.63 |
| CDX89994 | Canola | nucleus | 41.26 | 44.22 |
| CDY32449 | Canola | nucleus | 36.8 | 44.2 |
| CDY32450 | Canola | nucleus | 36.06 | 43.3 |
| CDY11741 | Canola | nucleus | 21.93 | 42.45 |
| CDX90132 | Canola | nucleus | 19.33 | 42.28 |
| CDY55325 | Canola | nucleus | 38.66 | 40.94 |
| CDX89995 | Canola | nucleus | 47.96 | 36.34 |
| CDY15224 | Canola | cytosol | 47.58 | 34.22 |
| AT1G02250.1 | Thale cress | nucleus | 44.61 | 33.15 |
| CDY15218 | Canola | nucleus | 43.12 | 31.78 |
| AT1G02230.1 | Thale cress | nucleus | 40.15 | 30.08 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 27.88 | 28.96 |
| CDX89990 | Canola | nucleus | 41.64 | 28.28 |
| CDY15214 | Canola | nucleus | 29.74 | 27.03 |
| AT3G04420.1 | Thale cress | nucleus | 34.2 | 26.9 |
| CDY59815 | Canola | cytosol | 26.02 | 26.22 |
| CDY15225 | Canola | nucleus | 37.92 | 25.56 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 38.29 | 24.24 |
| CDX89993 | Canola | nucleus | 40.89 | 23.55 |
| CDY07138 | Canola | nucleus | 24.91 | 23.26 |
| KRH06324 | Soybean | cytosol | 23.05 | 23.22 |
| AT1G02220.1 | Thale cress | nucleus | 32.71 | 22.34 |
| CDX89996 | Canola | nucleus | 18.59 | 19.38 |
| CDY07135 | Canola | nucleus | 26.39 | 19.14 |
| CDY15215 | Canola | nucleus | 29.0 | 18.35 |
| CDY15212 | Canola | nucleus | 29.0 | 18.35 |
| KRH47750 | Soybean | cytosol | 20.82 | 18.18 |
| CDY07136 | Canola | cytosol | 27.14 | 17.14 |
| CDY59814 | Canola | cytosol | 26.02 | 16.47 |
| Os06t0101800-01 | Rice | nucleus | 21.56 | 16.16 |
| CDX89999 | Canola | nucleus | 27.88 | 15.79 |
| CDX97252 | Canola | cytosol | 24.54 | 15.46 |
| CDY59812 | Canola | cytosol | 25.28 | 15.08 |
| KRH06327 | Soybean | cytosol | 22.3 | 15.0 |
| KRH06326 | Soybean | nucleus | 23.05 | 14.39 |
| KRH47748 | Soybean | cytosol | 21.56 | 14.32 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 24.91 | 13.79 |
| CDY15217 | Canola | nucleus | 17.84 | 13.75 |
| KRH47747 | Soybean | nucleus | 22.68 | 12.27 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 22.3 | 11.36 |
| TraesCS7D01G000200.1 | Wheat | plastid | 23.05 | 11.05 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 21.56 | 10.94 |
| TraesCS4A01G499900.1 | Wheat | plastid | 22.68 | 10.59 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 21.56 | 9.49 |
| EER87676 | Sorghum | plastid | 21.56 | 8.99 |
| CDY07137 | Canola | extracellular, plasma membrane | 8.18 | 7.01 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DL69 | EnsemblPlants:CDX89991 | ProteinID:CDX89991 | ProteinID:CDX89991.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00150489001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF57 | SUPFAM:SSF101941 | UniParc:UPI0004EE2CA6 | SEG:seg | : | : |
Description
BnaA10g00910D
Coordinates
chrLK031861:+:1134202..1135273
Molecular Weight (calculated)
29752.0 Da
IEP (calculated)
4.708
GRAVY (calculated)
-1.009
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MENRVGFRFI PTDQEIVDYY IRLKNRGGSD TNHVDKAIRA VDICSFDPWE LPSKSRRESR DQVWYFFCRK DNRGERQSRK TKSGFWKKTG PTMDIFQKRG
101: DREKIGEKRV LVFHLSGSKS KSDWVMHEYV ATFLPPTDQM TYTLCKLKFK GDASDLPSSS GGDGGGGDGG CGDDGGGGCD GDGGGGDRCD GGDGCGGGDG
201: DGGGGGGVDE HNQYLITHMN NSGGYEDPSQ FNVSTDDFNC FLNYNDDEEE QGNTMFMQYD RNDYRPNCP
101: DREKIGEKRV LVFHLSGSKS KSDWVMHEYV ATFLPPTDQM TYTLCKLKFK GDASDLPSSS GGDGGGGDGG CGDDGGGGCD GDGGGGDRCD GGDGCGGGDG
201: DGGGGGGVDE HNQYLITHMN NSGGYEDPSQ FNVSTDDFNC FLNYNDDEEE QGNTMFMQYD RNDYRPNCP
001: MMNPVGFRFR PNDEEIVDHY LRPKNLDSDT SHVDEVISTV DICSFEPWDL PSKSMIKSRD GVWYFFSVKE MKYNRGDQQR RRTNSGFWKK TGKTMTVMRK
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
Arabidopsis Description
NAC004NAC domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81913]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.