Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032615.1-P | Field mustard | nucleus | 98.66 | 98.66 |
| CDY32449 | Canola | nucleus | 93.75 | 93.75 |
| CDY55325 | Canola | nucleus | 72.77 | 64.17 |
| CDY55326 | Canola | nucleus | 57.59 | 53.31 |
| CDY15220 | Canola | nucleus | 42.86 | 47.52 |
| CDX89994 | Canola | nucleus | 50.45 | 45.02 |
| CDY11741 | Canola | nucleus | 25.0 | 40.29 |
| CDY15223 | Canola | nucleus | 37.95 | 40.09 |
| CDX90132 | Canola | nucleus | 20.98 | 38.21 |
| CDX89991 | Canola | nucleus | 43.3 | 36.06 |
| CDX89995 | Canola | nucleus | 46.88 | 29.58 |
| AT1G02250.1 | Thale cress | nucleus | 47.32 | 29.28 |
| CDY15218 | Canola | nucleus | 46.88 | 28.77 |
| CDY59815 | Canola | cytosol | 33.04 | 27.72 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 31.25 | 27.03 |
| AT1G02230.1 | Thale cress | nucleus | 41.52 | 25.91 |
| CDY07138 | Canola | nucleus | 32.59 | 25.35 |
| CDX89990 | Canola | nucleus | 44.64 | 25.25 |
| AT3G04420.1 | Thale cress | nucleus | 37.95 | 24.85 |
| CDY15224 | Canola | cytosol | 40.62 | 24.33 |
| KRH06324 | Soybean | cytosol | 28.57 | 23.97 |
| CDY15214 | Canola | nucleus | 30.36 | 22.97 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 42.86 | 22.59 |
| AT1G02220.1 | Thale cress | nucleus | 37.95 | 21.57 |
| CDY15225 | Canola | nucleus | 38.39 | 21.55 |
| CDX89996 | Canola | nucleus | 23.66 | 20.54 |
| CDX89993 | Canola | nucleus | 40.18 | 19.27 |
| KRH47750 | Soybean | cytosol | 26.34 | 19.16 |
| CDY07135 | Canola | nucleus | 31.7 | 19.14 |
| Os06t0101800-01 | Rice | nucleus | 29.91 | 18.66 |
| CDY15212 | Canola | nucleus | 32.59 | 17.18 |
| CDX97252 | Canola | cytosol | 32.59 | 17.1 |
| CDY15215 | Canola | nucleus | 32.14 | 16.94 |
| CDY59814 | Canola | cytosol | 29.91 | 15.76 |
| CDY07136 | Canola | cytosol | 29.91 | 15.73 |
| CDX89999 | Canola | nucleus | 32.59 | 15.37 |
| CDY59812 | Canola | cytosol | 30.8 | 15.3 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 33.04 | 15.23 |
| CDY15217 | Canola | nucleus | 23.21 | 14.9 |
| KRH06326 | Soybean | nucleus | 27.68 | 14.39 |
| KRH06327 | Soybean | cytosol | 25.45 | 14.25 |
| KRH47748 | Soybean | cytosol | 25.0 | 13.83 |
| KRH47747 | Soybean | nucleus | 29.02 | 13.08 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 29.02 | 12.31 |
| TraesCS7D01G000200.1 | Wheat | plastid | 29.02 | 11.59 |
| TraesCS4A01G499900.1 | Wheat | plastid | 29.02 | 11.28 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 26.34 | 11.13 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 30.36 | 11.13 |
| EER87676 | Sorghum | plastid | 29.91 | 10.39 |
| CDY07137 | Canola | extracellular, plasma membrane | 8.93 | 6.37 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078H169 | UniProt:A0A078H169 | EnsemblPlants:CDY32450 | ProteinID:CDY32450 |
| ProteinID:CDY32450.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00052419001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF57 | SUPFAM:SSF101941 | UniParc:UPI0004EEC777 | SEG:seg | : | : |
Description
BnaA09g51460DBnaA09g51460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H169]
Coordinates
chrLK032295:-:72928..73925
Molecular Weight (calculated)
25440.6 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.826
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNNMVGFRF RPTDEELVEH YLRPKNNGGG STTSSQIINT VNICNLDPWE LPPLSRMASS DQVWYFFGRK ESRYNRGERQ KRKTKSGYWK KTGKTLPITR
101: KSGNHETIGE KRVLMFYTNG SRSNWVMHEY RASCLSPNDS GAYTICKVQF KGEASEISSS SGVDHVVHTH SLPTPMNNPV GSEGLQSPSQ FSGNQQEMQF
201: DAETEMDFED LLNYDLNSLL DSEF
101: KSGNHETIGE KRVLMFYTNG SRSNWVMHEY RASCLSPNDS GAYTICKVQF KGEASEISSS SGVDHVVHTH SLPTPMNNPV GSEGLQSPSQ FSGNQQEMQF
201: DAETEMDFED LLNYDLNSLL DSEF
001: MMNPVGFRFR PNDEEIVDHY LRPKNLDSDT SHVDEVISTV DICSFEPWDL PSKSMIKSRD GVWYFFSVKE MKYNRGDQQR RRTNSGFWKK TGKTMTVMRK
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
Arabidopsis Description
NAC004NAC domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81913]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.