Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033298.1-P | Field mustard | nucleus | 82.19 | 80.21 |
| CDX89995 | Canola | nucleus | 74.25 | 76.34 |
| CDY15223 | Canola | nucleus | 27.4 | 47.17 |
| CDY32450 | Canola | nucleus | 28.77 | 46.88 |
| CDY32449 | Canola | nucleus | 27.95 | 45.54 |
| CDY15220 | Canola | nucleus | 24.93 | 45.05 |
| CDX89991 | Canola | nucleus | 31.78 | 43.12 |
| CDY55325 | Canola | nucleus | 28.49 | 40.94 |
| CDY55326 | Canola | nucleus | 27.12 | 40.91 |
| CDX89994 | Canola | nucleus | 27.95 | 40.64 |
| AT1G02250.1 | Thale cress | nucleus | 38.36 | 38.67 |
| AT1G02230.1 | Thale cress | nucleus | 36.44 | 37.05 |
| CDY15225 | Canola | nucleus | 40.0 | 36.59 |
| CDX89990 | Canola | nucleus | 39.45 | 36.36 |
| CDY11741 | Canola | nucleus | 13.7 | 35.97 |
| AT3G04420.1 | Thale cress | nucleus | 30.68 | 32.75 |
| CDX90132 | Canola | nucleus | 10.96 | 32.52 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 36.44 | 31.29 |
| AT1G02220.1 | Thale cress | nucleus | 33.15 | 30.71 |
| CDX89993 | Canola | nucleus | 37.81 | 29.55 |
| CDY15224 | Canola | cytosol | 28.49 | 27.81 |
| CDY07138 | Canola | nucleus | 20.27 | 25.69 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 18.08 | 25.48 |
| CDY59815 | Canola | cytosol | 18.63 | 25.47 |
| CDY15214 | Canola | nucleus | 19.45 | 23.99 |
| CDY07135 | Canola | nucleus | 22.19 | 21.83 |
| CDX97252 | Canola | cytosol | 24.11 | 20.61 |
| CDX89996 | Canola | nucleus | 14.25 | 20.16 |
| KRH06324 | Soybean | cytosol | 14.25 | 19.48 |
| CDY59814 | Canola | cytosol | 22.47 | 19.29 |
| CDY15212 | Canola | nucleus | 22.19 | 19.06 |
| CDY15215 | Canola | nucleus | 21.64 | 18.59 |
| CDY07136 | Canola | cytosol | 21.1 | 18.08 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 23.56 | 17.7 |
| KRH47750 | Soybean | cytosol | 14.79 | 17.53 |
| CDX89999 | Canola | nucleus | 22.19 | 17.05 |
| Os06t0101800-01 | Rice | nucleus | 16.71 | 16.99 |
| CDY59812 | Canola | cytosol | 20.82 | 16.85 |
| KRH06327 | Soybean | cytosol | 16.99 | 15.5 |
| CDY15217 | Canola | nucleus | 14.79 | 15.47 |
| KRH06326 | Soybean | nucleus | 18.08 | 15.31 |
| KRH47748 | Soybean | cytosol | 16.71 | 15.06 |
| KRH47747 | Soybean | nucleus | 17.53 | 12.88 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 15.34 | 10.61 |
| TraesCS7D01G000200.1 | Wheat | plastid | 16.16 | 10.52 |
| TraesCS4A01G499900.1 | Wheat | plastid | 15.62 | 9.9 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 16.44 | 9.82 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 13.97 | 9.62 |
| CDY07137 | Canola | extracellular, plasma membrane | 7.95 | 9.24 |
| EER87676 | Sorghum | plastid | 15.62 | 8.84 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FSE3 | UniProt:A0A078FSE3 | EnsemblPlants:CDY15218 | ProteinID:CDY15218 |
| ProteinID:CDY15218.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00085411001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF58 | SUPFAM:SSF101941 | UniParc:UPI0004EDFC77 | SEG:seg | : | : |
Description
BnaC05g00970DBnaC05g00970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSE3]
Coordinates
chrLK032052:-:528425..531096
Molecular Weight (calculated)
41680.8 Da
IEP (calculated)
7.567
GRAVY (calculated)
-0.781
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAPRWTDLS CNLDWMLKNL GGDTSHVDKA ISTVDICSFE PWELPSKSRR ESRDQIWYFF GRKENKYNRG ERQSRITKSA FWKKTGVTTN IIRKRGNREK
101: IGEKRVLVFH SNSEWVMHEY VSTFLSPTQT TYTVCKVIFK GDPRDLPSSS APGGGGGEVE HNHSQFTHMN NSGEFEGLQN QRHFTGLLDA EKETQIHDAL
201: CRGLDSVSTH DLNSFINCGN NDEEEHVNLL FMHENRNDYR PKISLTGFID HSDDEDSDSD LISATTTVSL ILLCFGSSNR RIDQITDLQN SPNSTTKLIS
301: PTQVRKTSLD ASKEKSDVQG NEMGEYYKMD QEVINKKRGS FFYRKIRSCI KKTLLCSSIP PTPRT
101: IGEKRVLVFH SNSEWVMHEY VSTFLSPTQT TYTVCKVIFK GDPRDLPSSS APGGGGGEVE HNHSQFTHMN NSGEFEGLQN QRHFTGLLDA EKETQIHDAL
201: CRGLDSVSTH DLNSFINCGN NDEEEHVNLL FMHENRNDYR PKISLTGFID HSDDEDSDSD LISATTTVSL ILLCFGSSNR RIDQITDLQN SPNSTTKLIS
301: PTQVRKTSLD ASKEKSDVQG NEMGEYYKMD QEVINKKRGS FFYRKIRSCI KKTLLCSSIP PTPRT
001: MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT
Arabidopsis Description
NAC005NAC domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O81914]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.