Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07138 | Canola | nucleus | 83.15 | 77.08 |
| CDY32449 | Canola | nucleus | 28.09 | 33.48 |
| CDY55326 | Canola | nucleus | 29.96 | 33.06 |
| CDY32450 | Canola | nucleus | 27.72 | 33.04 |
| CDY11741 | Canola | nucleus | 16.1 | 30.94 |
| CDX90132 | Canola | nucleus | 14.23 | 30.89 |
| CDY15223 | Canola | nucleus | 23.6 | 29.72 |
| CDY07135 | Canola | nucleus | 41.2 | 29.65 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 28.46 | 29.34 |
| CDY55325 | Canola | nucleus | 27.34 | 28.74 |
| CDX97252 | Canola | cytosol | 45.69 | 28.57 |
| CDY15220 | Canola | nucleus | 20.97 | 27.72 |
| CDX89994 | Canola | nucleus | 25.84 | 27.49 |
| CDY59814 | Canola | cytosol | 43.07 | 27.06 |
| KRH06324 | Soybean | cytosol | 26.59 | 26.59 |
| CDX89991 | Canola | nucleus | 26.22 | 26.02 |
| CDY15214 | Canola | nucleus | 28.84 | 26.01 |
| CDX89996 | Canola | nucleus | 25.09 | 25.97 |
| CDY07136 | Canola | cytosol | 41.2 | 25.82 |
| CDY59812 | Canola | cytosol | 41.95 | 24.83 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 44.19 | 24.28 |
| KRH47750 | Soybean | cytosol | 25.84 | 22.4 |
| Os06t0101800-01 | Rice | nucleus | 26.97 | 20.06 |
| CDX89995 | Canola | nucleus | 25.47 | 19.15 |
| CDY15215 | Canola | nucleus | 30.34 | 19.06 |
| CDY15218 | Canola | nucleus | 25.47 | 18.63 |
| KRH06327 | Soybean | cytosol | 26.97 | 18.0 |
| CDY15224 | Canola | cytosol | 24.72 | 17.65 |
| CDY15217 | Canola | nucleus | 22.47 | 17.19 |
| CDY15212 | Canola | nucleus | 27.34 | 17.18 |
| KRH06326 | Soybean | nucleus | 27.34 | 16.94 |
| CDX89990 | Canola | nucleus | 25.09 | 16.92 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 26.59 | 16.71 |
| CDX89999 | Canola | nucleus | 29.21 | 16.42 |
| KRH47747 | Soybean | nucleus | 29.96 | 16.1 |
| KRH47748 | Soybean | cytosol | 23.97 | 15.8 |
| CDY15225 | Canola | nucleus | 23.22 | 15.54 |
| CDX89993 | Canola | nucleus | 26.22 | 14.99 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 28.09 | 14.2 |
| TraesCS4A01G499900.1 | Wheat | plastid | 29.59 | 13.72 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 26.22 | 13.21 |
| TraesCS7D01G000200.1 | Wheat | plastid | 26.97 | 12.83 |
| EER87676 | Sorghum | plastid | 26.59 | 11.01 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 25.09 | 10.97 |
| CDY07137 | Canola | extracellular, plasma membrane | 10.11 | 8.6 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078J8N8 | UniProt:A0A078J8N8 | EnsemblPlants:CDY59815 | ProteinID:CDY59815 |
| ProteinID:CDY59815.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00027754001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF109 | SUPFAM:SSF101941 | UniParc:UPI0004EEBE5F | SEG:seg | : | : |
Description
BnaA09g51630DBnaA09g51630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8N8]
Coordinates
chrLK033808:+:21791..23733
Molecular Weight (calculated)
30393.2 Da
IEP (calculated)
5.709
GRAVY (calculated)
-0.460
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: METSNVGFRF CPTDEELINY FLKNKILGKP WLVDDKIREV SICSYEPASL PALSMIKSKD LVWYFLSPKE YKSPKKSLTK RTTPSGFWKS TGKDRKIKED
101: KRRDGVVIGI KKTLVYHEGK SSNAVPTPWI MHEYHITCLP LADQSTYVIC KLFYKGNVGD IPSGSNSTKP SHYLVISDSN TVEATNTPPQ VEQAGQESLS
201: GFSVNDVTML MNEQEDLSPW DTLCPIPNTL FIDNNDNTKI ESLLADHQEF ITQENFEEYM LKWSCLL
101: KRRDGVVIGI KKTLVYHEGK SSNAVPTPWI MHEYHITCLP LADQSTYVIC KLFYKGNVGD IPSGSNSTKP SHYLVISDSN TVEATNTPPQ VEQAGQESLS
201: GFSVNDVTML MNEQEDLSPW DTLCPIPNTL FIDNNDNTKI ESLLADHQEF ITQENFEEYM LKWSCLL
001: MMKDPTGYRF SPTGEEVINH YLKNKILGKT WLVDEAISEI NILNHKPSKD LPKLARIQSE DLEWYFFSPI EYTNPNKMKM KRTTGSGFWK PSGVDRKIRD
101: KRGNGVVIGI KKTLVYHEGK SPHGVRTPWV MHEYHITCLP HHKRKYVVCQ VKYKGEAAEI SYEPSPSLVS DSHTVIAING EPEPELQVEQ PGKENLLGMS
201: VDDLIEPMNQ QEEPQGPHLA PNDDEFIRGL RHVDREPVEY LFANEENMDG LSIMNDLTIP MIAQQEDLIL SEWEGFIAAT FFSDNNNNNN LNVHQLTSFL
301: PG
101: KRGNGVVIGI KKTLVYHEGK SPHGVRTPWV MHEYHITCLP HHKRKYVVCQ VKYKGEAAEI SYEPSPSLVS DSHTVIAING EPEPELQVEQ PGKENLLGMS
201: VDDLIEPMNQ QEEPQGPHLA PNDDEFIRGL RHVDREPVEY LFANEENMDG LSIMNDLTIP MIAQQEDLIL SEWEGFIAAT FFSDNNNNNN LNVHQLTSFL
301: PG
Arabidopsis Description
anac067F11O4.3 [Source:UniProtKB/TrEMBL;Acc:O82593]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.