Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04430.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT3G04430.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT3G04430.1 | CDY23174 | AT3G51920.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G04430.1 | Thale cress | nucleus | 48.84 | 63.64 |
| Bra033297.1-P | Field mustard | nucleus | 55.04 | 63.11 |
| CDY15217 | Canola | nucleus | 73.64 | 54.44 |
| CDY59815 | Canola | cytosol | 25.97 | 25.09 |
| CDY32449 | Canola | nucleus | 20.93 | 24.11 |
| CDY32450 | Canola | nucleus | 20.54 | 23.66 |
| KRH06324 | Soybean | cytosol | 24.42 | 23.6 |
| CDY07138 | Canola | nucleus | 25.97 | 23.26 |
| CDY55326 | Canola | nucleus | 21.71 | 23.14 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 22.87 | 22.78 |
| CDY15220 | Canola | nucleus | 17.83 | 22.77 |
| CDY15223 | Canola | nucleus | 17.83 | 21.7 |
| CDY55325 | Canola | nucleus | 21.32 | 21.65 |
| CDY11741 | Canola | nucleus | 11.24 | 20.86 |
| CDX89994 | Canola | nucleus | 19.77 | 20.32 |
| CDY15214 | Canola | nucleus | 23.26 | 20.27 |
| CDX90132 | Canola | nucleus | 9.3 | 19.51 |
| CDX89991 | Canola | nucleus | 19.38 | 18.59 |
| KRH47750 | Soybean | cytosol | 21.32 | 17.86 |
| Os06t0101800-01 | Rice | nucleus | 22.48 | 16.16 |
| CDY07135 | Canola | nucleus | 22.87 | 15.9 |
| CDX89995 | Canola | nucleus | 21.32 | 15.49 |
| CDX97252 | Canola | cytosol | 25.19 | 15.22 |
| CDY07136 | Canola | cytosol | 24.42 | 14.79 |
| CDY15224 | Canola | cytosol | 20.93 | 14.44 |
| KRH06327 | Soybean | cytosol | 22.09 | 14.25 |
| CDY15218 | Canola | nucleus | 20.16 | 14.25 |
| CDY59814 | Canola | cytosol | 23.26 | 14.12 |
| KRH06326 | Soybean | nucleus | 23.26 | 13.92 |
| CDX89990 | Canola | nucleus | 20.93 | 13.64 |
| KRH47748 | Soybean | cytosol | 20.93 | 13.33 |
| CDY59812 | Canola | cytosol | 23.26 | 13.3 |
| KRH47747 | Soybean | nucleus | 25.58 | 13.28 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 24.81 | 13.17 |
| CDY15225 | Canola | nucleus | 20.16 | 13.03 |
| CDY15215 | Canola | nucleus | 20.93 | 12.71 |
| CDY15212 | Canola | nucleus | 20.16 | 12.24 |
| CDX89993 | Canola | nucleus | 20.93 | 11.56 |
| CDX89999 | Canola | nucleus | 20.16 | 10.95 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 22.09 | 10.8 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 17.44 | 10.59 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 21.71 | 10.57 |
| TraesCS7D01G000200.1 | Wheat | plastid | 21.71 | 9.98 |
| TraesCS4A01G499900.1 | Wheat | plastid | 21.71 | 9.72 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 22.48 | 9.49 |
| EER87676 | Sorghum | plastid | 22.48 | 8.99 |
| CDY07137 | Canola | extracellular, plasma membrane | 6.98 | 5.73 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DL74 | EnsemblPlants:CDX89996 | ProteinID:CDX89996 | ProteinID:CDX89996.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00150494001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF7 | SUPFAM:SSF101941 | UniParc:UPI0004EDE9C2 | : | : | : |
Description
BnaA10g00860D
Coordinates
chrLK031861:-:1160532..1162397
Molecular Weight (calculated)
29364.6 Da
IEP (calculated)
6.958
GRAVY (calculated)
-0.708
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRYTFNPPE DELINYYLNN KITENDDPEE KQINEVNICH HEPADLPGLA KIESGHTWYF ISPVEKFGKL NRRKRASKTG HWKITGNSCT IKDTDGNPIG
101: LKKFLVFQEN KNRRSSTLLP TPAQQHKFTW IIHEFHSFLH HPNKDAFVLC KLKKKTRSRS GVAVDASPAV TDLSPTIISD PILNDSLMLT HHKDPVEDYG
201: GDYCNDLEEL TPELDSSSGL LRGENGHVYG QNTVENSNVS DTTLRKKLLS YFIGIEMK
101: LKKFLVFQEN KNRRSSTLLP TPAQQHKFTW IIHEFHSFLH HPNKDAFVLC KLKKKTRSRS GVAVDASPAV TDLSPTIISD PILNDSLMLT HHKDPVEDYG
201: GDYCNDLEEL TPELDSSSGL LRGENGHVYG QNTVENSNVS DTTLRKKLLS YFIGIEMK
001: MYRCTFNPPE EELINYYLNN KITENDDLVG KQIAEVNILH HEPADLPGLA KIESSHTWYF ISPVEKFGKL NRTKRVSRSG HWKITGNSRT IKDVDGNPIG
101: LKKFLVFQEN KRSSSSSLST TTTQQQKTNW IIHEFHSFLP HPNKMLTENK NEDYGGDYCN GLDELLQSLE QGESSGLLFG ENGHACEQDT AENSNVTM
101: LKKFLVFQEN KRSSSSSLST TTTQQQKTNW IIHEFHSFLP HPNKMLTENK NEDYGGDYCN GLDELLQSLE QGESSGLLFG ENGHACEQDT AENSNVTM
Arabidopsis Description
anac049NAC domain containing protein 49 [Source:UniProtKB/TrEMBL;Acc:Q9M844]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.