Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033297.1-P | Field mustard | nucleus | 64.65 | 56.89 |
| CDX89996 | Canola | nucleus | 63.64 | 48.84 |
| CDY15217 | Canola | nucleus | 59.09 | 33.52 |
| AT1G02210.1 | Thale cress | cytosol, nucleus, plastid | 10.1 | 22.99 |
| KRH06324 | Soybean | cytosol | 28.28 | 20.97 |
| AT4G01520.1 | Thale cress | nucleus | 29.29 | 19.21 |
| KRH47750 | Soybean | cytosol | 25.25 | 16.23 |
| AT1G02230.1 | Thale cress | nucleus | 26.26 | 14.48 |
| Os06t0101800-01 | Rice | nucleus | 24.75 | 13.65 |
| AT3G04420.1 | Thale cress | nucleus | 23.23 | 13.45 |
| AT4G01550.1 | Thale cress | cytosol, golgi, nucleus | 30.81 | 13.35 |
| AT4G01540.1 | Thale cress | cytosol | 31.82 | 13.32 |
| AT1G02250.1 | Thale cress | nucleus | 24.24 | 13.26 |
| KRH06327 | Soybean | cytosol | 26.77 | 13.25 |
| AT1G01010.1 | Thale cress | nucleus | 27.78 | 12.82 |
| KRH06326 | Soybean | nucleus | 27.27 | 12.53 |
| KRH47748 | Soybean | cytosol | 24.24 | 11.85 |
| AT1G02220.1 | Thale cress | nucleus | 23.23 | 11.68 |
| KRH47747 | Soybean | nucleus | 28.28 | 11.27 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 23.23 | 8.71 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 23.23 | 8.68 |
| TraesCS7D01G000200.1 | Wheat | plastid | 23.74 | 8.38 |
| TraesCS4A01G499900.1 | Wheat | plastid | 24.24 | 8.33 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 25.25 | 8.18 |
| EER87676 | Sorghum | plastid | 25.25 | 7.75 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:819598 | ProteinID:AAF63774.1 | ProteinID:AEE74081.1 | ArrayExpress:AT3G04430 |
| EnsemblPlantsGene:AT3G04430 | RefSeq:AT3G04430 | TAIR:AT3G04430 | RefSeq:AT3G04430-TAIR-G | EnsemblPlants:AT3G04430.1 | TAIR:AT3G04430.1 |
| Unigene:At.53181 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_187093.1 | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF7 | UniProt:Q9M844 | SUPFAM:SSF101941 | UniParc:UPI00000A4D3A | Symbol:anac049 |
| SEG:seg | : | : | : | : | : |
Description
anac049NAC domain containing protein 49 [Source:UniProtKB/TrEMBL;Acc:Q9M844]
Coordinates
chr3:-:1175506..1176986
Molecular Weight (calculated)
22507.2 Da
IEP (calculated)
5.836
GRAVY (calculated)
-0.773
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRCTFNPPE EELINYYLNN KITENDDLVG KQIAEVNILH HEPADLPGLA KIESSHTWYF ISPVEKFGKL NRTKRVSRSG HWKITGNSRT IKDVDGNPIG
101: LKKFLVFQEN KRSSSSSLST TTTQQQKTNW IIHEFHSFLP HPNKMLTENK NEDYGGDYCN GLDELLQSLE QGESSGLLFG ENGHACEQDT AENSNVTM
101: LKKFLVFQEN KRSSSSSLST TTTQQQKTNW IIHEFHSFLP HPNKMLTENK NEDYGGDYCN GLDELLQSLE QGESSGLLFG ENGHACEQDT AENSNVTM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.