Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G04420.1 | Thale cress | nucleus | 57.61 | 66.37 |
| AT1G02230.1 | Thale cress | nucleus | 40.36 | 44.29 |
| CDY15220 | Canola | nucleus | 21.57 | 42.08 |
| AT1G02250.1 | Thale cress | nucleus | 36.8 | 40.06 |
| Bra033303.1-P | Field mustard | nucleus | 38.83 | 39.84 |
| CDY11741 | Canola | nucleus | 13.45 | 38.13 |
| CDY32450 | Canola | nucleus | 21.57 | 37.95 |
| Bra032615.1-P | Field mustard | nucleus | 21.57 | 37.95 |
| CDY55326 | Canola | nucleus | 23.1 | 37.6 |
| CDY15223 | Canola | nucleus | 20.05 | 37.26 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 40.1 | 37.18 |
| CDX89990 | Canola | nucleus | 37.31 | 37.12 |
| Bra033308.1-P | Field mustard | nucleus | 37.31 | 37.12 |
| CDY32449 | Canola | nucleus | 21.07 | 37.05 |
| Bra033299.1-P | Field mustard | nucleus | 23.6 | 37.05 |
| CDX89994 | Canola | nucleus | 23.6 | 37.05 |
| Bra033302.1-P | Field mustard | nucleus | 24.37 | 36.92 |
| CDY55325 | Canola | nucleus | 23.35 | 36.22 |
| CDX89995 | Canola | nucleus | 32.23 | 35.77 |
| Bra010895.1-P | Field mustard | nucleus | 11.17 | 35.77 |
| CDX90132 | Canola | nucleus | 11.17 | 35.77 |
| Bra033298.1-P | Field mustard | nucleus | 33.5 | 35.29 |
| CDX89993 | Canola | nucleus | 41.62 | 35.12 |
| CDY15225 | Canola | nucleus | 34.77 | 34.34 |
| AT1G02210.1 | Thale cress | cytosol, nucleus, plastid | 7.36 | 33.33 |
| Bra033300.1-P | Field mustard | nucleus | 38.83 | 33.33 |
| CDY15218 | Canola | nucleus | 30.71 | 33.15 |
| CDX89991 | Canola | nucleus | 22.34 | 32.71 |
| Bra033305.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 21.83 | 30.5 |
| CDY15224 | Canola | cytosol | 24.11 | 25.4 |
| KRH06324 | Soybean | cytosol | 17.01 | 25.09 |
| Bra033306.1-P | Field mustard | nucleus | 23.1 | 23.7 |
| AT3G04430.1 | Thale cress | nucleus | 11.68 | 23.23 |
| KRH47750 | Soybean | cytosol | 17.51 | 22.4 |
| AT4G01520.1 | Thale cress | nucleus | 16.24 | 21.19 |
| AT1G01010.1 | Thale cress | nucleus | 22.08 | 20.28 |
| AT4G01550.1 | Thale cress | cytosol, golgi, nucleus | 23.1 | 19.91 |
| KRH47748 | Soybean | cytosol | 20.05 | 19.51 |
| KRH06327 | Soybean | cytosol | 19.54 | 19.25 |
| KRH06326 | Soybean | nucleus | 20.81 | 19.03 |
| Os06t0101800-01 | Rice | nucleus | 17.01 | 18.66 |
| AT4G01540.1 | Thale cress | cytosol | 20.3 | 16.91 |
| KRH47747 | Soybean | nucleus | 18.02 | 14.29 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 17.51 | 13.02 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 18.02 | 11.62 |
| TraesCS4A01G499900.1 | Wheat | plastid | 16.5 | 11.28 |
| TraesCS7D01G000200.1 | Wheat | plastid | 15.99 | 11.23 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 14.97 | 11.17 |
| EER87676 | Sorghum | plastid | 17.77 | 10.85 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:839476 | UniProt:A0A178WBA1 | ProteinID:AAC24382.1 | EMBL:AB493423 |
| ProteinID:AEE27404.1 | Symbol:ANAC003 | ArrayExpress:AT1G02220 | EnsemblPlantsGene:AT1G02220 | RefSeq:AT1G02220 | TAIR:AT1G02220 |
| RefSeq:AT1G02220-TAIR-G | EnsemblPlants:AT1G02220.1 | TAIR:AT1G02220.1 | EMBL:BT020269 | EMBL:BT022063 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0044212 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_171725.1 | ProteinID:OAP15710.1 | PFAM:PF02365 | PO:PO:0000013 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF58 | UniProt:Q5PP28 | SUPFAM:SSF101941 | UniParc:UPI0000162C03 | SEG:seg | : |
Description
NAC003NAC domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP28]
Coordinates
chr1:-:428650..430720
Molecular Weight (calculated)
45155.0 Da
IEP (calculated)
5.672
GRAVY (calculated)
-0.789
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: METPVGLRFC PTDEEIVVDY LWPKNSDRDT SHVDRFINTV PVCRLDPWEL PCQSRIKLKD VAWCFFRPKE NKYGRGDQQM RKTKSGFWKS TGRPKPIMRN
101: RQQIGEKKIL MFYTSKESKS DWVIHEYHGF SHNQMMMTYT LCKVMFNGGM REKSSSSPSS SGVSGIEQSR RDSLIPQLVN NSEGSSLHRE DPSQFGDVLQ
201: EAPIEDAKLT EELVKWLMND EDDAQIEDAI PIEEWETWLN DIDDAKEKSI MFMHDNRSDY RPPNSLTGVF SDDVSSDDND SDLLTPKTNS IQTSSTCDSF
301: GSSNHRIDQI KDLQESPTST INLVSLTQEV SQALITSIDT AEKKKNPYDD AQGTEIGEHK LGQETIKKKR AGFFHRMIQK FVKKIHLCSS ISRT
101: RQQIGEKKIL MFYTSKESKS DWVIHEYHGF SHNQMMMTYT LCKVMFNGGM REKSSSSPSS SGVSGIEQSR RDSLIPQLVN NSEGSSLHRE DPSQFGDVLQ
201: EAPIEDAKLT EELVKWLMND EDDAQIEDAI PIEEWETWLN DIDDAKEKSI MFMHDNRSDY RPPNSLTGVF SDDVSSDDND SDLLTPKTNS IQTSSTCDSF
301: GSSNHRIDQI KDLQESPTST INLVSLTQEV SQALITSIDT AEKKKNPYDD AQGTEIGEHK LGQETIKKKR AGFFHRMIQK FVKKIHLCSS ISRT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.