Factsheet for Bra033299.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89994	Canola	nucleus	90.84	90.84
Bra032615.1-P	Field mustard	nucleus	49.0	54.91
Bra033302.1-P	Field mustard	nucleus	44.22	42.69
Bra010895.1-P	Field mustard	nucleus	20.72	42.28
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	41.04	36.52
AT1G02250.1	Thale cress	nucleus	51.39	35.64
AT1G02230.1	Thale cress	nucleus	46.61	32.59
Bra033298.1-P	Field mustard	nucleus	48.21	32.35
Bra027596.1-P	Field mustard	nucleus	30.68	31.82
Bra033303.1-P	Field mustard	nucleus	45.02	29.43
Bra033308.1-P	Field mustard	nucleus	46.22	29.29
AT3G04420.1	Thale cress	nucleus	38.65	28.36
Bra033306.1-P	Field mustard	nucleus	38.65	25.26
KRH06324	Soybean	cytosol	26.69	25.09
AT1G02220.1	Thale cress	nucleus	37.05	23.6
Bra033297.1-P	Field mustard	nucleus	21.12	23.56
Bra036328.1-P	Field mustard	nucleus	26.69	23.26
Bra036326.1-P	Field mustard	nucleus	31.87	21.62
Bra033300.1-P	Field mustard	nucleus	39.04	21.35
KRH47750	Soybean	cytosol	25.5	20.78
Bra036327.1-P	Field mustard	cytosol	30.28	17.88
Os06t0101800-01	Rice	nucleus	25.5	17.83
Bra033296.1-P	Field mustard	nucleus	31.87	16.84
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	28.69	16.25
KRH06327	Soybean	cytosol	25.1	15.75
KRH47748	Soybean	cytosol	25.1	15.56
KRH06326	Soybean	nucleus	25.9	15.08
KRH47747	Soybean	nucleus	24.7	12.47
HORVU7Hr1G000910.1	Barley	nucleus	26.29	12.45
TraesCS7A01G000300.1	Wheat	nucleus	25.9	12.31
TraesCS4A01G499900.1	Wheat	plastid	27.09	11.81
TraesCS7D01G000200.1	Wheat	plastid	25.5	11.41
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	25.1	10.31
EER87676	Sorghum	plastid	25.5	9.92

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033299	EnsemblPlants:Bra033299.1	EnsemblPlants:Bra033299.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EWW4	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF57	SUPFAM:SSF101941
UniParc:UPI0002544F76	:	:	:	:	:

Description

AT1G02230 (E=2e-060) ANAC004 | ANAC004 (Arabidopsis NAC domain containing protein 4); transcription factor

Coordinates

chrA10:+:4399271..4400314

Molecular Weight (calculated)

28624.7 Da

IEP (calculated)

8.459

GRAVY (calculated)

-0.801

Length

251 amino acids

Sequence
(BLAST)

001: MENMVGLRFL PTDEELVDHY LRLKNHGGSN TSPVDQVIST INICNFDPWE LPRHSSMESK DQVWYFFGRK EKRYNRGERQ IRKTKSGFWK KTGVTMDIKR
101: KRSAHREKIG EKRVLVFHSS GSKTNWIMHE YDAACLSPTQ NMTYTICKVH KKGEAREISS PGSGIDALSL SLVTHMNNSG GESSPAASEK PKNAHQLSGF
201: SDKKQETELE EAIHGAFDNL SSYDWKYLLD DDEQSKTVAM QKSLTGFLDW A

Best Arabidopsis Sequence Match ( AT1G02250.1 )
(BLAST)

001: MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT

Arabidopsis Description

NAC005NAC domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O81914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.