Factsheet for Bra033296.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000340.1-P
Bra004768.1-P
Bra004803.1-P
Bra012289.1-P
Bra016411.1-P
Bra016620.1-P
Bra016774.1-P
Bra017936.1-P
Bra018466.1-P
Bra019762.1-P
Bra019965.1-P
Bra022748.1-P
Bra025321.1-P
Bra026074.1-P
Bra026690.1-P
Bra026727.1-P
Bra027498.1-P
Bra029689.1-P
Bra030605.1-P
Bra033037.1-P
Bra036498.1-P
Bra036891.1-P
Bra037667.1-P
Bra040042.1-P
Bra040984.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01010.1	Bra018466.1-P	AT1G10030.1	21798944
AT1G01010.1	Bra019965.1-P	AT1G10030.1	21798944
AT1G01010.1	Bra016774.1-P	AT1G12390.1	21798944
AT1G01010.1	Bra019762.1-P	AT1G12390.1	21798944
AT1G01010.1	Bra026074.1-P	AT1G16240.1	21798944
AT1G01010.1	Bra026727.1-P	AT1G16240.1	21798944
AT1G01010.1	Bra016620.1-P	AT1G17080.1	21798944
AT1G01010.1	Bra026690.1-P	AT1G17080.1	21798944
AT1G01010.1	Bra040984.1-P	AT1G17080.1	21798944
AT1G01010.1	Bra012289.1-P	AT1G77350.1	21798944
AT1G01010.1	Bra016411.1-P	AT1G77350.1	21798944
AT1G01010.1	Bra017936.1-P	AT1G77350.1	21798944
AT1G01010.1	Bra036498.1-P	AT2G20740.1	21798944
AT1G01010.1	Bra030605.1-P	AT2G32380.1	21798944
AT1G01010.1	Bra004768.1-P	AT2G43510.1	21798944
AT1G01010.1	Bra000340.1-P	AT2G44080.1	21798944
AT1G01010.1	Bra004803.1-P	AT2G44080.1	21798944
AT1G01010.1	Bra037667.1-P	AT2G44080.1	21798944
AT1G01010.1	Bra029689.1-P	AT3G07950.1	21798944
AT1G01010.1	Bra040042.1-P	AT3G07950.1	21798944
AT1G01010.1	Bra025321.1-P	AT3G28080.1	21798944
AT1G01010.1	Bra033037.1-P	AT3G28080.1	21798944
AT1G01010.1	Bra036891.1-P	AT4G14730.1	21798944
AT1G01010.1	Bra027498.1-P	AT5G43460.1	21798944
AT1G01010.1	Bra022748.1-P	AT5G51010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89999	Canola	nucleus	97.68	97.68
AT1G01010.1	Thale cress	nucleus	31.58	34.97
Bra032615.1-P	Field mustard	nucleus	15.58	33.04
Bra033299.1-P	Field mustard	nucleus	16.84	31.87
Bra027596.1-P	Field mustard	nucleus	16.0	31.41
Bra010895.1-P	Field mustard	nucleus	8.0	30.89
Bra036328.1-P	Field mustard	nucleus	17.89	29.51
Bra033302.1-P	Field mustard	nucleus	16.0	29.23
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	16.0	26.95
Bra033297.1-P	Field mustard	nucleus	12.21	25.78
Bra036327.1-P	Field mustard	cytosol	22.95	25.65
Bra036326.1-P	Field mustard	nucleus	19.79	25.41
KRH06324	Soybean	cytosol	14.11	25.09
Bra033303.1-P	Field mustard	nucleus	19.16	23.7
Bra033298.1-P	Field mustard	nucleus	18.32	23.26
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	21.47	23.02
Bra033308.1-P	Field mustard	nucleus	18.74	22.47
Bra033306.1-P	Field mustard	nucleus	17.89	22.14
KRH47750	Soybean	cytosol	13.68	21.1
Bra033300.1-P	Field mustard	nucleus	18.95	19.61
KRH47747	Soybean	nucleus	19.58	18.71
KRH47748	Soybean	cytosol	15.79	18.52
KRH06326	Soybean	nucleus	16.0	17.63
Os06t0101800-01	Rice	nucleus	13.26	17.55
KRH06327	Soybean	cytosol	14.53	17.25
TraesCS7A01G000300.1	Wheat	nucleus	14.74	13.26
TraesCS7D01G000200.1	Wheat	plastid	14.95	12.66
HORVU7Hr1G000910.1	Barley	nucleus	13.89	12.45
TraesCS4A01G499900.1	Wheat	plastid	14.95	12.33
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	14.32	11.13
EER87676	Sorghum	plastid	13.68	10.08

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033296	EnsemblPlants:Bra033296.1	EnsemblPlants:Bra033296.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093
UniProt:M4EWW1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF57	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0002544F79	SEG:seg	:

Description

AT1G01010 (E=1e-094) ANAC001 | ANAC001 (Arabidopsis NAC domain containing protein 1); transcription factor

Coordinates

chrA10:+:4424259..4426521

Molecular Weight (calculated)

54034.9 Da

IEP (calculated)

5.848

GRAVY (calculated)

-0.667

Length

475 amino acids

Sequence
(BLAST)

001: MVEKPGFEFR PYDEELVGFY LRQKLLGNHS LVDGVIREIK ICSLDPWDLR FQSKIKSRDP VWYFLSLIEN NRGRQSRTTP SGSWKLTGDP VNVNDRWGNL
101: TGFRGKIGYK RVLTFSKAKS SSSSVSEWVM HELHYTHTDL PEHKRTTYVI CRLEYKGDDV NILSTPTFAP TMANSASSAV DQSLQGNSGH YNTLSEYDSG
201: YQFNGNSDMQ QSFQGYSEYF NPTSEYGLAN QSNNWFSNLQ QQQVPYSAPY QDDSDVWRQV VEEDWPSLID ERTCMRVDLI HHRPKKPVTG IFVGDSSDDD
301: TDSTIGKGTW SSTDSVGSKD VPYHAPKDAT PSLSTVEPLY NDSSDDDTDS TIGKGTWRST DSVGSNNVPY HAPKYATPSL STVEPLYNDE PQEQPKQLML
401: QLQGKQKVIN KQKSECEWKR AEDSIKKAPS TYAVKQSWIV LEEISQRKSR WIYLKNIVGL LLFIIFIIGW IILLG

Best Arabidopsis Sequence Match ( AT1G01010.1 )
(BLAST)

001: MEDQVGFGFR PNDEELVGHY LRNKIEGNTS RDVEVAISEV NICSYDPWNL RFQSKYKSRD AMWYFFSRRE NNKGNRQSRT TVSGKWKLTG ESVEVKDQWG
101: FCSEGFRGKI GHKRVLVFLD GRYPDKTKSD WVIHEFHYDL LPEHQRTYVI CRLEYKGDDA DILSAYAIDP TPAFVPNMTS SAGSVVNQSR QRNSGSYNTY
201: SEYDSANHGQ QFNENSNIMQ QQPLQGSFNP LLEYDFANHG GQWLSDYIDL QQQVPYLAPY ENESEMIWKH VIEENFEFLV DERTSMQQHY SDHRPKKPVS
301: GVLPDDSSDT ETGSMIFEDT SSSTDSVGSS DEPGHTRIDD IPSLNIIEPL HNYKAQEQPK QQSKEKVISS QKSECEWKMA EDSIKIPPST NTVKQSWIVL
401: ENAQWNYLKN MIIGVLLFIS VISWIILVG

Arabidopsis Description

NAC001NAC domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV96]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.