Factsheet for Bra036891.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012567.1-P
Bra013361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14730.1	Bra012567.1-P	AT4G19030.1	21798944
AT4G14730.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29762	Canola	plasma membrane	99.16	99.16
CDY16255	Canola	plasma membrane	97.91	97.91
AT4G14730.1	Thale cress	plasma membrane	73.64	74.89
Bra040445.1-P	Field mustard	plasma membrane	54.39	54.39
VIT_05s0020g04030.t01	Wine grape	plasma membrane	49.79	53.85
Bra018534.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	49.37	53.39
GSMUA_Achr9P10630_001	Banana	plasma membrane	52.3	51.44
Bra033373.1-P	Field mustard	plasma membrane	52.72	51.43
KRH35929	Soybean	plasma membrane	50.63	50.21
KRG90848	Soybean	plasma membrane	48.95	48.35
Os07t0177200-01	Rice	mitochondrion	44.77	47.98
EER90743	Sorghum	plasma membrane	48.95	47.37
Os03t0795600-01	Rice	plasma membrane	48.54	46.96
GSMUA_Achr8P20490_001	Banana	peroxisome, plasma membrane, vacuole	47.7	46.72
Zm00001d034431_P001	Maize	plasma membrane	46.44	44.58
Bra038082.1-P	Field mustard	golgi, peroxisome, plasma membrane	46.86	44.09
TraesCS5D01G444900.1	Wheat	plasma membrane	45.19	44.08
TraesCS5A01G437700.1	Wheat	plasma membrane	44.77	44.03
TraesCS5B01G440500.1	Wheat	plasma membrane	45.19	43.9
Os11t0581900-01	Rice	plasma membrane	47.28	43.8
Bra012786.1-P	Field mustard	plasma membrane	46.03	42.97
EES10004	Sorghum	peroxisome	46.03	40.59
PGSC0003DMT400016496	Potato	cytosol, golgi, peroxisome	41.0	40.5
Solyc09g082590.2.1	Tomato	cytosol, golgi, peroxisome	39.33	38.84
Zm00001d052964_P002	Maize	plasma membrane	42.68	35.79
Bra031411.1-P	Field mustard	plastid	21.34	27.27

Protein Annotations

EnsemblPlants:Bra036891.1	EnsemblPlants:Bra036891.1-P	EnsemblPlantsGene:Bra036891	GO:GO:0005575	GO:GO:0006950	GO:GO:0008150
GO:GO:0008219	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0050832	GO:GO:0060548	InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF31	PFAM:PF01027
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002545013	UniProt:M4F731	MapMan:35.1	:

Description

AT4G14730 (E=1e-075) | transmembrane protein-related

Coordinates

chrA01:-:12334019..12335155

Molecular Weight (calculated)

26600.6 Da

IEP (calculated)

8.205

GRAVY (calculated)

1.083

Length

239 amino acids

Sequence
(BLAST)

001: MEKSDIESGV VIGGKELYPK MTESTELRWA FIRKVYAILT LQLIVTVGVS SVVFFVGEIS VFITTTTPGL VVFFVSLLLP LLMLWPLIVF AKKHPVNLII
101: LMLFTLSISF AVGLCCSFSK GKIVLEAAVL TATMVVGLTI YTFWAVRRGH DFSFLAPFFF GSLLIILVFA TIQVFHPLGK LSSMIFSCVA SVCFCGYIIY
201: DTNQLIKKLN YDEYIHAAIS LYLDVINLFL NLVGILVHT

Best Arabidopsis Sequence Match ( AT4G14730.1 )
(BLAST)

001: MAKSDIETGG GNELYPGMKE SSELRWAFIR KLYSILSLQL LVTVGVSAVV YFVRPIPEFI TETHRGLAVF FVILLLPLLL LWPLLAFEKK HPINCIVLSI
101: FTLSISFSVG ICCSLSQGRI VLEAAILTAV MVFGLTIYTF WAVKRGHDFS FLGPFLFGAL LIILVFTLLQ IFHPLGKLSS MIFSGIASIV FCGYIIFDTN
201: QLIKKLNYDE YITAAIRLYL DVMNLFLSLL GIISN

Arabidopsis Description

LFG1Protein LIFEGUARD 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JIE8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.