Factsheet for GSMUA_Achr9P10630_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14730.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g065610.1.1	Tomato	extracellular	15.23	63.79
GSMUA_Achr8P20490_001	Banana	peroxisome, plasma membrane, vacuole	62.55	62.3
VIT_07s0151g00280.t01	Wine grape	plasma membrane	56.38	61.99
GSMUA_Achr4P21150_001	Banana	plasma membrane	59.67	59.43
GSMUA_Achr8P20500_001	Banana	plasma membrane	59.26	59.26
Os03t0795600-01	Rice	plasma membrane	60.08	59.11
Os07t0177200-01	Rice	mitochondrion	53.91	58.74
PGSC0003DMT400049703	Potato	plasma membrane	58.02	58.26
GSMUA_Achr1P14120_001	Banana	plasma membrane	58.44	58.2
Bra040445.1-P	Field mustard	plasma membrane	57.2	58.16
EER90743	Sorghum	plasma membrane	58.85	57.89
CDX93913	Canola	plasma membrane	56.79	57.74
CDY53716	Canola	plasma membrane	56.79	57.74
Bra018534.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	52.26	57.47
AT3G63310.1	Thale cress	plasma membrane	56.38	57.32
KRG95577	Soybean	plasma membrane	57.2	57.2
Bra033373.1-P	Field mustard	plasma membrane	57.61	57.14
AT1G03070.3	Thale cress	plasma membrane	58.02	57.09
TraesCS5B01G440500.1	Wheat	plasma membrane	57.61	56.91
TraesCS5A01G437700.1	Wheat	plasma membrane	56.79	56.79
TraesCS5D01G444900.1	Wheat	plasma membrane	57.2	56.73
CDX89914	Canola	plasma membrane	57.2	56.73
GSMUA_Achr7P25670_001	Banana	plasma membrane	57.2	56.73
KRH32057	Soybean	plasma membrane	56.38	56.61
CDY18147	Canola	plasma membrane	57.61	56.45
VIT_05s0020g04030.t01	Wine grape	plasma membrane	49.79	54.75
Zm00001d034431_P001	Maize	plasma membrane	55.97	54.62
PGSC0003DMT400051889	Potato	plasma membrane	54.73	54.29
CDX97282	Canola	plasma membrane	55.14	54.03
CDX91308	Canola	plasma membrane	54.73	53.63
AT4G02690.1	Thale cress	plasma membrane	54.32	53.23
Solyc06g084130.2.1	Tomato	plasma membrane	54.73	52.78
CDY16255	Canola	plasma membrane	51.85	52.72
Bra036891.1-P	Field mustard	plasma membrane	51.44	52.3
CDY29762	Canola	plasma membrane	51.44	52.3
GSMUA_Achr1P27190_001	Banana	plasma membrane	52.26	51.84
CDY28900	Canola	extracellular	13.99	51.52
AT4G14730.1	Thale cress	plasma membrane	49.38	51.06
KRH71378	Soybean	mitochondrion	56.79	48.76
KRG90848	Soybean	plasma membrane	48.56	48.76
KRH35929	Soybean	plasma membrane	47.74	48.13
GSMUA_Achr5P27390_001	Banana	plasma membrane	46.91	45.97
GSMUA_Achr8P21800_001	Banana	peroxisome, plasma membrane, vacuole	46.5	45.94
GSMUA_Achr10P...	Banana	peroxisome	46.09	45.53
PGSC0003DMT400016496	Potato	cytosol, golgi, peroxisome	44.44	44.63
Solyc09g082590.2.1	Tomato	cytosol, golgi, peroxisome	44.44	44.63
CDX98559	Canola	mitochondrion, plasma membrane	20.16	33.11
Bra031411.1-P	Field mustard	plastid	23.46	30.48
CDY49039	Canola	plastid	22.63	29.89

Protein Annotations

EnsemblPlants:GSMUA_Achr9P10630_001	EnsemblPlants:GSMUA_Achr9T10630_001	EnsemblPlantsGene:GSMUA_Achr9G10630_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF44	PFAM:PF01027	SEG:seg	TMHMM:TMhelix
UniParc:UPI00029509AA	UniProt:M0TZ72	MapMan:35.1	:	:	:

Description

Putative BI1-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G10630_001]

Coordinates

chr9:-:6924495..6926800

Molecular Weight (calculated)

26815.7 Da

IEP (calculated)

8.546

GRAVY (calculated)

0.947

Length

243 amino acids

Sequence
(BLAST)

001: MTKKGGDIET GYGGGSALYP NMMESPQLRW AFIRKVYSIV ALQILLTIAV AGVVNFVEPV RSFLLSHTTA SLVVYILIII SPFLVLLPMI YFRERHPLNL
101: LLLTLFTICI SLAIGMACAT SKGKIVLQSA ALTATVVVGL TLYTFWAAKR GYDFNFLGPF LCAALIVLML YCIIQIFIPM GKVSTTIYGC VAAIIFSGFI
201: IYDTDNLIKR HSYDQYICAS ISLYLDIINL FTALLTVFNS VDS

Best Arabidopsis Sequence Match ( AT1G03070.1 )
(BLAST)

001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE

Arabidopsis Description

LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.