CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89914	Canola	plasma membrane	97.58	98.78
AT1G03070.3	Thale cress	plasma membrane	91.94	92.31
Solyc09g065610.1.1	Tomato	extracellular	20.56	87.93
CDX91308	Canola	plasma membrane	84.68	84.68
CDX97282	Canola	plasma membrane	84.68	84.68
CDX93913	Canola	plasma membrane	77.82	80.75
CDY53716	Canola	plasma membrane	77.82	80.75
PGSC0003DMT400049703	Potato	plasma membrane	78.63	80.58
KRH32057	Soybean	plasma membrane	77.02	78.93
KRH71378	Soybean	mitochondrion	77.82	68.2
CDY28900	Canola	extracellular	17.34	65.15
GSMUA_Achr9P10630_001	Banana	plasma membrane	56.45	57.61
EER90743	Sorghum	plasma membrane	55.24	55.47
Zm00001d034431_P001	Maize	plasma membrane	53.63	53.41
CDY16255	Canola	plasma membrane	50.81	52.72
CDY29762	Canola	plasma membrane	50.4	52.3
GSMUA_Achr8P20490_001	Banana	peroxisome, plasma membrane, vacuole	50.4	51.23
TraesCS5B01G440500.1	Wheat	plasma membrane	50.81	51.22
TraesCS5A01G437700.1	Wheat	plasma membrane	50.0	51.03
TraesCS5D01G444900.1	Wheat	plasma membrane	50.4	51.02
Os03t0795600-01	Rice	plasma membrane	50.81	51.01
CDX90589	Canola	golgi, peroxisome, plasma membrane	51.61	50.2
CDY09761	Canola	golgi, peroxisome, plasma membrane	51.61	50.0
CDY09066	Canola	golgi, peroxisome, plasma membrane	51.61	50.0
Os07t0177200-01	Rice	mitochondrion	44.35	49.33
CDY22739	Canola	plasma membrane	52.02	47.43
Os11t0581900-01	Rice	plasma membrane	43.55	41.86
CDX98559	Canola	mitochondrion, plasma membrane	23.79	39.86
EES10004	Sorghum	peroxisome	42.34	38.75
Zm00001d052964_P002	Maize	plasma membrane	42.74	37.19
CDY49039	Canola	plastid	25.4	34.24
CDY09067	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY18147	EnsemblPlantsGene:GSBRNA2T00002670001	GO:A0A078FZE8	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF31	PFAM:PF01027	ProteinID:CDY18147	ProteinID:CDY18147.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDB7CC	UniProt:A0A078FZE8	MapMan:35.1	:

Description

BnaC05g01700DBnaC05g01700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZE8]

Coordinates

chrLK032083:+:75472..76851

Molecular Weight (calculated)

27930.8 Da

IEP (calculated)

8.268

GRAVY (calculated)

0.883

Length

248 amino acids

Sequence
(BLAST)

001: MHKWNLPYRK DDVESGGNSG ERPLYPTMLE SPELRWGFIR KVYSIIAFQL LLTIAVAATV VTVRPIAVFF STTSAGLALW IVLIITPLLV LCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LSCAFTSGKV ILESAILTTV VVLSLTFYTF WAAKKGYDFN FLGPFLFGAI IVLMIFALIQ IFFPLGRISV MIYGCLASII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLSLL TIFRAAES

Best Arabidopsis Sequence Match ( AT1G03070.2 )
(BLAST)

001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE

Arabidopsis Description

LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.