Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G444900.1 | Wheat | plasma membrane | 96.71 | 95.92 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 95.47 | 94.31 |
| Os03t0795600-01 | Rice | plasma membrane | 67.49 | 66.4 |
| EER90743 | Sorghum | plasma membrane | 64.2 | 63.16 |
| Solyc09g065610.1.1 | Tomato | extracellular | 14.81 | 62.07 |
| Zm00001d034431_P001 | Maize | plasma membrane | 62.55 | 61.04 |
| GSMUA_Achr9P10630_001 | Banana | plasma membrane | 56.79 | 56.79 |
| GSMUA_Achr8P20490_001 | Banana | peroxisome, plasma membrane, vacuole | 55.14 | 54.92 |
| CDX93913 | Canola | plasma membrane | 53.91 | 54.81 |
| CDY53716 | Canola | plasma membrane | 53.91 | 54.81 |
| Bra040445.1-P | Field mustard | plasma membrane | 53.5 | 54.39 |
| VIT_07s0151g00280.t01 | Wine grape | plasma membrane | 48.56 | 53.39 |
| AT3G63310.1 | Thale cress | plasma membrane | 52.26 | 53.14 |
| TraesCS3A01G481200.1 | Wheat | plasma membrane | 50.62 | 52.12 |
| PGSC0003DMT400049703 | Potato | plasma membrane | 51.44 | 51.65 |
| KRH32057 | Soybean | plasma membrane | 51.44 | 51.65 |
| TraesCS5A01G437800.1 | Wheat | peroxisome, plasma membrane, vacuole | 51.85 | 51.64 |
| PGSC0003DMT400051889 | Potato | plasma membrane | 51.85 | 51.43 |
| TraesCS5A01G384100.1 | Wheat | golgi, plasma membrane, vacuole | 52.67 | 51.41 |
| Bra018534.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 46.5 | 51.13 |
| AT1G03070.3 | Thale cress | plasma membrane | 51.85 | 51.01 |
| TraesCS3A01G480500.1 | Wheat | plasma membrane | 52.67 | 51.0 |
| TraesCS3A01G481400.1 | Wheat | plasma membrane | 48.97 | 50.21 |
| Bra033373.1-P | Field mustard | plasma membrane | 50.62 | 50.2 |
| CDY18147 | Canola | plasma membrane | 51.03 | 50.0 |
| CDX89914 | Canola | plasma membrane | 50.21 | 49.8 |
| KRG95577 | Soybean | plasma membrane | 49.79 | 49.79 |
| Solyc06g084130.2.1 | Tomato | plasma membrane | 51.03 | 49.21 |
| VIT_05s0020g04030.t01 | Wine grape | plasma membrane | 44.44 | 48.87 |
| AT4G02690.1 | Thale cress | plasma membrane | 49.79 | 48.79 |
| CDX97282 | Canola | plasma membrane | 48.56 | 47.58 |
| CDX91308 | Canola | plasma membrane | 48.56 | 47.58 |
| AT4G14730.1 | Thale cress | plasma membrane | 44.86 | 46.38 |
| TraesCS3A01G481300.1 | Wheat | plasma membrane | 47.33 | 46.18 |
| KRG90848 | Soybean | plasma membrane | 45.27 | 45.45 |
| CDY29762 | Canola | plasma membrane | 44.44 | 45.19 |
| CDY16255 | Canola | plasma membrane | 44.03 | 44.77 |
| Bra036891.1-P | Field mustard | plasma membrane | 44.03 | 44.77 |
| KRH71378 | Soybean | mitochondrion | 51.85 | 44.52 |
| Solyc09g082590.2.1 | Tomato | cytosol, golgi, peroxisome | 44.03 | 44.21 |
| KRH35929 | Soybean | plasma membrane | 43.62 | 43.98 |
| PGSC0003DMT400016496 | Potato | cytosol, golgi, peroxisome | 42.8 | 42.98 |
| CDY28900 | Canola | extracellular | 11.11 | 40.91 |
| TraesCS1A01G251600.1 | Wheat | peroxisome | 42.8 | 39.69 |
| CDX98559 | Canola | mitochondrion, plasma membrane | 14.81 | 24.32 |
| Bra031411.1-P | Field mustard | plastid | 17.7 | 22.99 |
| CDY49039 | Canola | plastid | 17.28 | 22.83 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G437700.1 | EnsemblPlantsGene:TraesCS5A01G437700 | InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF44 | PFAM:PF01027 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5A:-:619682746..619683556
Molecular Weight (calculated)
27102.2 Da
IEP (calculated)
7.825
GRAVY (calculated)
0.949
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKHDHHHYD VEACYPSGPD GYMIESPELR WAFIRKVYVI VSIQMLVTVA VAAAMNLTVC VRNFLLSRTL AALVAFILIL ISPLLVMLPM VYYRKKHPVN
101: MVFLGIFTVC VSLSVGLGCL TKRGPIIFEA AGMTLVVVVS LTAYTFWAGR RGHDFEFLGP FLFAACVILM LYAIVIILFP MGKTAVLVYG CIAALIFSAF
201: IIYDTDNLIK RYTYDEYVAA SITLYLDIIN LFRAILMALE AAD
101: MVFLGIFTVC VSLSVGLGCL TKRGPIIFEA AGMTLVVVVS LTAYTFWAGR RGHDFEFLGP FLFAACVILM LYAIVIILFP MGKTAVLVYG CIAALIFSAF
201: IIYDTDNLIK RYTYDEYVAA SITLYLDIIN LFRAILMALE AAD
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.