Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr4P10230_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14730.1 | GSMUA_Achr4P10230_001 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P10630_001 | Banana | plasma membrane | 62.3 | 62.55 |
| EER90743 | Sorghum | plasma membrane | 59.43 | 58.7 |
| Os07t0177200-01 | Rice | mitochondrion | 52.46 | 57.4 |
| Solyc09g065610.1.1 | Tomato | extracellular | 13.11 | 55.17 |
| TraesCS5A01G437700.1 | Wheat | plasma membrane | 54.92 | 55.14 |
| Zm00001d034431_P001 | Maize | plasma membrane | 56.15 | 55.02 |
| GSMUA_Achr4P21150_001 | Banana | plasma membrane | 54.92 | 54.92 |
| GSMUA_Achr7P25670_001 | Banana | plasma membrane | 54.92 | 54.69 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 54.92 | 54.47 |
| TraesCS5D01G444900.1 | Wheat | plasma membrane | 54.51 | 54.29 |
| Os03t0795600-01 | Rice | plasma membrane | 54.92 | 54.25 |
| Bra040445.1-P | Field mustard | plasma membrane | 52.87 | 53.97 |
| GSMUA_Achr8P20500_001 | Banana | plasma membrane | 53.69 | 53.91 |
| CDX93913 | Canola | plasma membrane | 52.46 | 53.56 |
| CDY53716 | Canola | plasma membrane | 52.46 | 53.56 |
| VIT_07s0151g00280.t01 | Wine grape | plasma membrane | 48.36 | 53.39 |
| VIT_05s0020g04030.t01 | Wine grape | plasma membrane | 47.95 | 52.94 |
| KRH32057 | Soybean | plasma membrane | 52.05 | 52.48 |
| GSMUA_Achr1P14120_001 | Banana | plasma membrane | 52.46 | 52.46 |
| AT3G63310.1 | Thale cress | plasma membrane | 51.23 | 52.3 |
| GSMUA_Achr1P27190_001 | Banana | plasma membrane | 52.46 | 52.24 |
| PGSC0003DMT400049703 | Potato | plasma membrane | 51.64 | 52.07 |
| AT1G03070.3 | Thale cress | plasma membrane | 52.05 | 51.42 |
| KRG95577 | Soybean | plasma membrane | 50.82 | 51.03 |
| Bra018534.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 45.9 | 50.68 |
| PGSC0003DMT400051889 | Potato | plasma membrane | 50.82 | 50.61 |
| Bra033373.1-P | Field mustard | plasma membrane | 50.82 | 50.61 |
| CDY18147 | Canola | plasma membrane | 51.23 | 50.4 |
| CDX89914 | Canola | plasma membrane | 50.41 | 50.2 |
| AT4G14730.1 | Thale cress | plasma membrane | 47.13 | 48.94 |
| CDY28900 | Canola | extracellular | 13.11 | 48.48 |
| Solyc06g084130.2.1 | Tomato | plasma membrane | 50.0 | 48.41 |
| CDY29762 | Canola | plasma membrane | 47.13 | 48.12 |
| CDY16255 | Canola | plasma membrane | 47.13 | 48.12 |
| CDX97282 | Canola | plasma membrane | 48.77 | 47.98 |
| CDX91308 | Canola | plasma membrane | 48.77 | 47.98 |
| Bra036891.1-P | Field mustard | plasma membrane | 46.72 | 47.7 |
| AT4G02690.1 | Thale cress | plasma membrane | 48.36 | 47.58 |
| KRG90848 | Soybean | plasma membrane | 46.31 | 46.69 |
| KRH71378 | Soybean | mitochondrion | 52.46 | 45.23 |
| KRH35929 | Soybean | plasma membrane | 44.67 | 45.23 |
| GSMUA_Achr5P27390_001 | Banana | plasma membrane | 45.08 | 44.35 |
| GSMUA_Achr10P... | Banana | peroxisome | 43.85 | 43.5 |
| GSMUA_Achr8P21800_001 | Banana | peroxisome, plasma membrane, vacuole | 43.44 | 43.09 |
| Solyc09g082590.2.1 | Tomato | cytosol, golgi, peroxisome | 42.62 | 42.98 |
| PGSC0003DMT400016496 | Potato | cytosol, golgi, peroxisome | 41.8 | 42.15 |
| CDX98559 | Canola | mitochondrion, plasma membrane | 17.21 | 28.38 |
| Bra031411.1-P | Field mustard | plastid | 20.08 | 26.2 |
| CDY49039 | Canola | plastid | 19.67 | 26.09 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P20490_001 | EnsemblPlants:GSMUA_Achr8T20490_001 | EnsemblPlantsGene:GSMUA_Achr8G20490_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF44 | PFAM:PF01027 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002961724 | UniProt:M0TS52 | MapMan:35.1 | : | : | : |
Description
Putative BI1-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G20490_001]
Coordinates
chr8:-:25686285..25687487
Molecular Weight (calculated)
26518.0 Da
IEP (calculated)
6.760
GRAVY (calculated)
0.923
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDWRGWDVE AGGAAAGGGA SLYPNMMESP QLRWAFIRKV YTIVALQIVI TIGVAAAINL IAPVRDFLLD RSTASFAAGV AIMILPFLVM LPMMYFSERH
101: PINFVLLVLF TVCIGFAVGL ACTTRGGTAI LEAATLTAAV VGGLTLYTFW AAKRGHDFSF LGPFLFAALL ALTIFSLIQV LFPMGTITTR VFGCISAVVF
201: AGFIIYDTDN LIKRHSYDQY VCAAISLYLD IINLFLALLS TMED
101: PINFVLLVLF TVCIGFAVGL ACTTRGGTAI LEAATLTAAV VGGLTLYTFW AAKRGHDFSF LGPFLFAALL ALTIFSLIQV LFPMGTITTR VFGCISAVVF
201: AGFIIYDTDN LIKRHSYDQY VCAAISLYLD IINLFLALLS TMED
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.