CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031411.1-P	Field mustard	plastid	85.33	83.96
CDY28900	Canola	extracellular	29.35	81.82
CDX98559	Canola	mitochondrion, plasma membrane	55.43	68.92
CDX91308	Canola	plasma membrane	38.04	28.23
CDX97282	Canola	plasma membrane	38.04	28.23
CDX89914	Canola	plasma membrane	34.78	26.12
PGSC0003DMT400049703	Potato	plasma membrane	34.24	26.03
CDX93913	Canola	plasma membrane	33.15	25.52
CDY53716	Canola	plasma membrane	33.15	25.52
CDY18147	Canola	plasma membrane	34.24	25.4
KRH32057	Soybean	plasma membrane	32.61	24.79
GSMUA_Achr9P10630_001	Banana	plasma membrane	29.89	22.63
KRH71378	Soybean	mitochondrion	32.61	21.2
CDY16255	Canola	plasma membrane	26.09	20.08
CDX90589	Canola	golgi, peroxisome, plasma membrane	27.72	20.0
CDY09761	Canola	golgi, peroxisome, plasma membrane	27.72	19.92
CDY09066	Canola	golgi, peroxisome, plasma membrane	27.72	19.92
GSMUA_Achr8P20490_001	Banana	peroxisome, plasma membrane, vacuole	26.09	19.67
CDY29762	Canola	plasma membrane	25.54	19.67
Os03t0795600-01	Rice	plasma membrane	25.54	19.03
Zm00001d034431_P001	Maize	plasma membrane	25.54	18.88
CDY22739	Canola	plasma membrane	27.72	18.75
EER90743	Sorghum	plasma membrane	24.46	18.22
Os07t0177200-01	Rice	mitochondrion	21.2	17.49
TraesCS5B01G440500.1	Wheat	plasma membrane	23.37	17.48
TraesCS5A01G437700.1	Wheat	plasma membrane	22.83	17.28
TraesCS5D01G444900.1	Wheat	plasma membrane	22.83	17.14
Os11t0581900-01	Rice	plasma membrane	23.91	17.05
EES10004	Sorghum	peroxisome	23.91	16.24
Zm00001d052964_P002	Maize	plasma membrane	23.91	15.44
Solyc09g065610.1.1	Tomato	extracellular	0.0	0.0
CDY09067	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY49039	EnsemblPlantsGene:GSBRNA2T00092257001	GO:A0A078II46	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF31	ProteinID:CDY49039	ProteinID:CDY49039.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0004EEF9EE	UniProt:A0A078II46	MapMan:35.2	:	:

Description

BnaA01g22850DBnaA01g22850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078II46]

Coordinates

chrLK032807:-:107457..108685

Molecular Weight (calculated)

19849.6 Da

IEP (calculated)

7.928

GRAVY (calculated)

0.521

Length

184 amino acids

Sequence
(BLAST)

001: MAKKKCELCD GVAAASPRRS IATTTARPVG FHCAANPASS SSVIHRCFSS ESAETIAKKK VEDVMPTATG HEKEELEAEL EVIPCVFFLC DGSIAMYLLG
101: EGGFRKALAK CALCMFLCVG TRKVILESAI LTTVVVLSLT VYTFWAAKRG YDFNFLGPFL FGALIVLIVF AMIQVTPLIP NSMP

Best Arabidopsis Sequence Match ( AT1G03070.1 )
(BLAST)

001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE

Arabidopsis Description

LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.