Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012786.1-P | Field mustard | plasma membrane | 99.22 | 98.83 |
| CDY09761 | Canola | golgi, peroxisome, plasma membrane | 98.43 | 98.05 |
| CDY09066 | Canola | golgi, peroxisome, plasma membrane | 97.65 | 97.27 |
| AT4G15470.1 | Thale cress | plasma membrane | 94.9 | 94.53 |
| CDY22739 | Canola | plasma membrane | 96.86 | 90.81 |
| Solyc01g080330.2.1 | Tomato | plasma membrane | 70.98 | 73.58 |
| PGSC0003DMT400033268 | Potato | plasma membrane | 70.98 | 73.58 |
| VIT_05s0020g02430.t01 | Wine grape | golgi, peroxisome, plasma membrane | 69.02 | 73.03 |
| KRH20943 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 66.67 | 69.11 |
| KRH11337 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 66.27 | 68.7 |
| GSMUA_Achr8P21800_001 | Banana | peroxisome, plasma membrane, vacuole | 62.35 | 64.63 |
| GSMUA_Achr10P... | Banana | peroxisome | 61.57 | 63.82 |
| GSMUA_Achr5P27390_001 | Banana | plasma membrane | 61.18 | 62.9 |
| HORVU1Hr1G061500.2 | Barley | peroxisome | 63.53 | 61.83 |
| TraesCS1D01G251100.1 | Wheat | golgi | 63.14 | 61.45 |
| TraesCS1A01G251600.1 | Wheat | peroxisome | 63.14 | 61.45 |
| PGSC0003DMT400035266 | Potato | peroxisome | 58.04 | 61.16 |
| TraesCS1B01G262200.1 | Wheat | peroxisome | 62.75 | 61.07 |
| Zm00001d038147_P001 | Maize | plasma membrane | 61.57 | 59.47 |
| Solyc07g042510.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 56.47 | 59.26 |
| Os05t0402300-02 | Rice | plasma membrane | 61.18 | 59.09 |
| KXG21947 | Sorghum | plasma membrane | 60.78 | 58.71 |
| CDY53716 | Canola | plasma membrane | 50.98 | 54.39 |
| CDX97282 | Canola | plasma membrane | 52.16 | 53.63 |
| CDX91308 | Canola | plasma membrane | 52.16 | 53.63 |
| CDX93913 | Canola | plasma membrane | 50.2 | 53.56 |
| CDX89914 | Canola | plasma membrane | 50.59 | 52.65 |
| CDY18147 | Canola | plasma membrane | 50.2 | 51.61 |
| CDY28900 | Canola | extracellular | 12.94 | 50.0 |
| CDY29762 | Canola | plasma membrane | 44.31 | 47.28 |
| CDY16255 | Canola | plasma membrane | 43.14 | 46.03 |
| CDX98559 | Canola | mitochondrion, plasma membrane | 17.25 | 29.73 |
| CDY49039 | Canola | plastid | 20.0 | 27.72 |
| CDY09067 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX90589 | EnsemblPlantsGene:GSBRNA2T00151226001 | GO:A0A078DQ77 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF31 | PFAM:PF01027 | ProteinID:CDX90589 | ProteinID:CDX90589.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF0EAC | MapMan:35.1 | : | : |
Description
BnaA03g41920D
Coordinates
chrLK031863:-:981972..983364
Molecular Weight (calculated)
28041.9 Da
IEP (calculated)
6.246
GRAVY (calculated)
0.748
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKPYGYASV SMSGDRAAGK DIDLEMGTGE ATLYPGLSYG ENQLRWGFIR KVYGILSAQL LLTTLISAVV VLNPPVNDVL TGSPGLLLFL CIIPFVLIWP
101: LHVYHQKHPV NLILLALFTI SLSFTVGVSC AMTEGRIVLE ALILTLSVVG SLTAYTFWAA KKGKDFSFLG PILFTSLIIL VVTSFMQMFF PLGPTSVAIY
201: GGISALVFCG YIVYDTDNLI KRFTYDEYIL ASVALYLDIL NLFLTILRIL RQGDN
101: LHVYHQKHPV NLILLALFTI SLSFTVGVSC AMTEGRIVLE ALILTLSVVG SLTAYTFWAA KKGKDFSFLG PILFTSLIIL VVTSFMQMFF PLGPTSVAIY
201: GGISALVFCG YIVYDTDNLI KRFTYDEYIL ASVALYLDIL NLFLTILRIL RQGDN
001: MDKPYGYASV SMSGIDRSAG KDIDLEMGVG EATLYPGLSY GENQLRWGFI RKVYGILSAQ LLLTTLISAV VVLNPPVNDL LTGSPGILLF LCIVPFILIW
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN
Arabidopsis Description
LFG5BI1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94A20]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.