CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
plasma membrane 2
golgi 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20943	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	98.78	98.78
PGSC0003DMT400033268	Potato	plasma membrane	74.39	74.39
Solyc01g080330.2.1	Tomato	plasma membrane	74.39	74.39
VIT_05s0020g02430.t01	Wine grape	golgi, peroxisome, plasma membrane	70.73	72.2
Bra038082.1-P	Field mustard	golgi, peroxisome, plasma membrane	68.7	66.54
CDX90589	Canola	golgi, peroxisome, plasma membrane	68.7	66.27
Bra012786.1-P	Field mustard	plasma membrane	68.7	66.02
CDY09761	Canola	golgi, peroxisome, plasma membrane	68.29	65.62
CDY09066	Canola	golgi, peroxisome, plasma membrane	68.29	65.62
AT4G15470.1	Thale cress	plasma membrane	67.89	65.23
GSMUA_Achr8P21800_001	Banana	peroxisome, plasma membrane, vacuole	63.41	63.41
PGSC0003DMT400035266	Potato	peroxisome	61.79	62.81
GSMUA_Achr10P...	Banana	peroxisome	62.2	62.2
CDY22739	Canola	plasma membrane	67.89	61.4
Solyc07g042510.2.1	Tomato	cytosol, peroxisome, plasma membrane	59.76	60.49
GSMUA_Achr5P27390_001	Banana	plasma membrane	60.16	59.68
TraesCS1A01G251600.1	Wheat	peroxisome	61.38	57.63
HORVU1Hr1G061500.2	Barley	peroxisome	60.98	57.25
TraesCS1D01G251100.1	Wheat	golgi	60.98	57.25
TraesCS1B01G262200.1	Wheat	peroxisome	60.57	56.87
Zm00001d038147_P001	Maize	plasma membrane	60.57	56.44
KRH67263	Soybean	extracellular	15.04	56.06
KXG21947	Sorghum	plasma membrane	59.76	55.68
Os05t0402300-02	Rice	plasma membrane	59.35	55.3
KRG95577	Soybean	plasma membrane	51.22	51.85
KRH32057	Soybean	plasma membrane	49.59	50.41
KRG90848	Soybean	plasma membrane	45.12	45.87
KRH35929	Soybean	plasma membrane	42.68	43.57
KRH71378	Soybean	mitochondrion	49.19	42.76
CDY09067	Canola	plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02009202	EnsemblPlants:KRH11337	EnsemblPlantsGene:GLYMA_15G101400	EntrezGene:100779265	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF31	PFAM:PF01027	ProteinID:KRH11337
ProteinID:KRH11337.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000233B2DF	UniProt:I1MFB5	MapMan:35.1

Description

hypothetical protein

Coordinates

chr15:-:7901836..7903669

Molecular Weight (calculated)

27491.9 Da

IEP (calculated)

6.793

GRAVY (calculated)

0.557

Length

246 amino acids

Sequence
(BLAST)

001: MFEPQQLYTR AKTEEFDLES GETLYPGLSV GENQLRWGFI RKVYGILSAQ IVLTTLVSVT TVFYTPINDL LKGNSTLLLI LLFLPFIFLI PLLKYQQKHP
101: HNYILLALFT VSISSTVGVT CANTDGKIVL EALILTSAVV SSLTGYAFWA SKKGKDFSFL GPVLFTSLFT LILTGMMQMF FPLGPTAHAI YGAIGAMIFS
201: GYIVYDTDNL IKRFTYDEYI GASVTLYLDI LNLFLSILRI LREANN

Best Arabidopsis Sequence Match ( AT4G15470.1 )
(BLAST)

001: MDKPYGYASV SMSGIDRSAG KDIDLEMGVG EATLYPGLSY GENQLRWGFI RKVYGILSAQ LLLTTLISAV VVLNPPVNDL LTGSPGILLF LCIVPFILIW
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN

Arabidopsis Description

LFG5BI1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94A20]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.