Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038147_P001 | Maize | plasma membrane | 89.39 | 89.39 |
| KXG21947 | Sorghum | plasma membrane | 87.5 | 87.5 |
| HORVU1Hr1G061500.2 | Barley | peroxisome | 81.82 | 82.44 |
| TraesCS1D01G251100.1 | Wheat | golgi | 81.06 | 81.68 |
| TraesCS1B01G262200.1 | Wheat | peroxisome | 80.68 | 81.3 |
| TraesCS1A01G251600.1 | Wheat | peroxisome | 80.68 | 81.3 |
| GSMUA_Achr5P27390_001 | Banana | plasma membrane | 70.08 | 74.6 |
| GSMUA_Achr8P21800_001 | Banana | peroxisome, plasma membrane, vacuole | 68.18 | 73.17 |
| GSMUA_Achr10P... | Banana | peroxisome | 67.42 | 72.36 |
| VIT_05s0020g02430.t01 | Wine grape | golgi, peroxisome, plasma membrane | 58.33 | 63.9 |
| Bra038082.1-P | Field mustard | golgi, peroxisome, plasma membrane | 59.09 | 61.42 |
| Solyc01g080330.2.1 | Tomato | plasma membrane | 57.2 | 61.38 |
| PGSC0003DMT400033268 | Potato | plasma membrane | 57.2 | 61.38 |
| CDX90589 | Canola | golgi, peroxisome, plasma membrane | 59.09 | 61.18 |
| Bra012786.1-P | Field mustard | plasma membrane | 59.09 | 60.94 |
| CDY09761 | Canola | golgi, peroxisome, plasma membrane | 59.09 | 60.94 |
| CDY09066 | Canola | golgi, peroxisome, plasma membrane | 59.09 | 60.94 |
| KRH20943 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 56.06 | 60.16 |
| AT4G15470.1 | Thale cress | plasma membrane | 58.33 | 60.16 |
| KRH11337 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 55.3 | 59.35 |
| PGSC0003DMT400035266 | Potato | peroxisome | 52.65 | 57.44 |
| Solyc07g042510.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 52.27 | 56.79 |
| CDY22739 | Canola | plasma membrane | 57.95 | 56.25 |
| Os03t0795800-01 | Rice | plasma membrane | 45.45 | 49.79 |
| Os07t0177300-01 | Rice | plasma membrane, plastid | 45.08 | 48.77 |
| Os03t0745600-01 | Rice | golgi, plasma membrane, vacuole | 45.45 | 48.19 |
| Os07t0177200-01 | Rice | mitochondrion | 34.85 | 41.26 |
| Os03t0795600-01 | Rice | plasma membrane | 36.74 | 39.27 |
| Os11t0581900-01 | Rice | plasma membrane | 35.98 | 36.82 |
| CDY09067 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EMBL:AK070043 | EnsemblPlants:Os05t0402300-02 | EnsemblPlantsGene:Os05g0402300 | EntrezGene:4338736 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF31 | PFAM:PF01027 | ProteinID:AAT85152.1 |
| ProteinID:AAT85204.1 | ProteinID:BAF17407.1 | ProteinID:BAS93922.1 | ProteinID:EEE63667.1 | RefSeq:XP_015640550.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0000401B1A | UniProt:Q6ATX8 | MapMan:35.1 | : | : |
Description
Uncharacterised protein family UPF0005 domain containing protein. (Os05t0402300-02)
Coordinates
chr5:-:19588424..19590720
Molecular Weight (calculated)
28763.4 Da
IEP (calculated)
7.139
GRAVY (calculated)
0.623
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAAEMQPL APAGYRRAPE MKEKVDASAV DLEAGTGETL YPGISRGESA LRWGFVRKVY GILAAQLLLT TAVSALTVLH PTLNATLSSS PTLALVLAVL
101: PFVLMVPLYH YQHKHPHNFV YLGLFTLCLS FSIGVACANT QGKIVLEALI LTSAVVASLT AYTFWASKKG KEFGYLGPIL FSALVLLVVI SFIQVFFPLG
201: SGPVALFGGL GALVFSGFII YDTENLIKRH TYDDYIWASV ELYLDILNLF LYILNMIRSM QSDN
101: PFVLMVPLYH YQHKHPHNFV YLGLFTLCLS FSIGVACANT QGKIVLEALI LTSAVVASLT AYTFWASKKG KEFGYLGPIL FSALVLLVVI SFIQVFFPLG
201: SGPVALFGGL GALVFSGFII YDTENLIKRH TYDDYIWASV ELYLDILNLF LYILNMIRSM QSDN
001: MDKPYGYASV SMSGIDRSAG KDIDLEMGVG EATLYPGLSY GENQLRWGFI RKVYGILSAQ LLLTTLISAV VVLNPPVNDL LTGSPGILLF LCIVPFILIW
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN
Arabidopsis Description
LFG5BI1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94A20]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.