Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98056 | Sorghum | plasma membrane | 87.3 | 85.89 |
| TraesCS3B01G525800.1 | Wheat | plasma membrane | 86.48 | 84.74 |
| TraesCS3A01G480500.1 | Wheat | plasma membrane | 86.48 | 84.06 |
| TraesCS3D01G475300.1 | Wheat | plasma membrane | 86.48 | 83.73 |
| TraesCS3B01G526300.1 | Wheat | plasma membrane | 82.79 | 83.47 |
| TraesCS3B01G525200.1 | Wheat | plasma membrane | 83.2 | 82.52 |
| TraesCS3D01G476300.1 | Wheat | plasma membrane | 82.79 | 82.45 |
| Zm00001d018938_P001 | Maize | plasma membrane | 88.52 | 82.44 |
| HORVU7Hr1G051300.1 | Barley | endoplasmic reticulum, plasma membrane | 75.0 | 81.33 |
| TraesCS3B01G525100.1 | Wheat | nucleus | 81.97 | 78.74 |
| TraesCS3D01G476400.1 | Wheat | plasma membrane | 76.23 | 78.48 |
| TraesCS3D01G476100.1 | Wheat | plasma membrane | 76.23 | 77.5 |
| TraesCS3A01G481200.1 | Wheat | plasma membrane | 74.59 | 77.12 |
| Os03t0795800-01 | Rice | plasma membrane | 75.41 | 76.35 |
| HORVU3Hr1G105430.1 | Barley | plasma membrane | 75.41 | 75.1 |
| TraesCS3D01G476000.1 | Wheat | plasma membrane | 74.59 | 74.9 |
| TraesCS3A01G481400.1 | Wheat | plasma membrane | 72.13 | 74.26 |
| TraesCS3B01G526500.1 | Wheat | plasma membrane | 74.59 | 73.39 |
| TraesCS2B01G463300.1 | Wheat | plasma membrane | 74.18 | 73.28 |
| TraesCS3D01G475900.1 | Wheat | peroxisome, plasma membrane, vacuole | 79.1 | 72.83 |
| Os03t0745600-01 | Rice | golgi, plasma membrane, vacuole | 72.54 | 71.08 |
| HORVU3Hr1G105460.2 | Barley | peroxisome, plasma membrane, plastid | 79.92 | 68.9 |
| HORVU3Hr1G105470.3 | Barley | mitochondrion, peroxisome, plastid | 79.92 | 67.71 |
| TraesCS3A01G481300.1 | Wheat | plasma membrane | 65.16 | 63.86 |
| TraesCS3B01G526400.1 | Wheat | plasma membrane | 60.66 | 58.73 |
| KRH67263 | Soybean | extracellular | 15.57 | 57.58 |
| HORVU3Hr1G061070.4 | Barley | plasma membrane | 30.33 | 55.64 |
| Os03t0795600-01 | Rice | plasma membrane | 53.28 | 52.63 |
| Os07t0177200-01 | Rice | mitochondrion | 46.31 | 50.67 |
| Os11t0581900-01 | Rice | plasma membrane | 48.77 | 46.12 |
| Os05t0402300-02 | Rice | plasma membrane | 48.77 | 45.08 |
Protein Annotations
| EnsemblPlants:Os07t0177300-01 | EnsemblPlantsGene:Os07g0177300 | EntrezGene:4342546 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF48 | PFAM:PF01027 | ProteinID:BAC83445.1 | ProteinID:BAD30317.1 |
| ProteinID:BAF20940.1 | ProteinID:BAT00298.1 | ProteinID:EAZ38886.1 | RefSeq:XP_015647076.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI00001BF323 | UniProt:Q6ZEY6 | MapMan:35.1 | : | : | : |
Description
Uncharacterised protein family UPF0005 domain containing protein. (Os07t0177300-01)
Coordinates
chr7:-:4089230..4092086
Molecular Weight (calculated)
27272.1 Da
IEP (calculated)
9.133
GRAVY (calculated)
0.880
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRYEKGGDV EAGTSGGARE LYPGMTEPPE MRWALIRKIY VILSMQLLLT AAVAAVVVKV RAISHFFVSS HAGLGLYIFL IILPFIVLCP LYYYHQKHPV
101: NLILLGLFTV AISFAVGMTC AFTSGKVILE SAILTTVVVF SLTAYTFWAA KRGRDFSFLG PFLFASLIVL LVFAFIQILF PLGRISQMIY GGIASLIFSG
201: YIVYDTDNII KRYTYDQYVW AAVSLYLDVI NLFLSLMTLF RAAD
101: NLILLGLFTV AISFAVGMTC AFTSGKVILE SAILTTVVVF SLTAYTFWAA KRGRDFSFLG PFLFASLIVL LVFAFIQILF PLGRISQMIY GGIASLIFSG
201: YIVYDTDNII KRYTYDQYVW AAVSLYLDVI NLFLSLMTLF RAAD
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.