Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G525200.1 | Wheat | plasma membrane | 89.37 | 92.28 |
| TraesCS3B01G526300.1 | Wheat | plasma membrane | 87.4 | 91.74 |
| TraesCS3D01G476100.1 | Wheat | plasma membrane | 85.83 | 90.83 |
| TraesCS3B01G525800.1 | Wheat | plasma membrane | 87.8 | 89.56 |
| Os07t0177300-01 | Rice | plasma membrane, plastid | 78.74 | 81.97 |
| TraesCS2B01G463300.1 | Wheat | plasma membrane | 79.53 | 81.78 |
| TraesCS3B01G526500.1 | Wheat | plasma membrane | 79.53 | 81.45 |
| EER98056 | Sorghum | plasma membrane | 78.35 | 80.24 |
| Zm00001d018938_P001 | Maize | plasma membrane | 79.53 | 77.1 |
| TraesCS5B01G440600.1 | Wheat | peroxisome, plasma membrane, vacuole | 69.29 | 72.13 |
| TraesCS5B01G388900.1 | Wheat | golgi, plasma membrane, vacuole | 67.32 | 68.67 |
| TraesCS3B01G526400.1 | Wheat | plasma membrane | 64.17 | 64.68 |
| HORVU3Hr1G061070.4 | Barley | plasma membrane | 31.5 | 60.15 |
| KRH67263 | Soybean | extracellular | 15.35 | 59.09 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 51.97 | 53.66 |
| TraesCS1B01G262200.1 | Wheat | peroxisome | 48.03 | 46.56 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G525100.1 | EnsemblPlantsGene:TraesCS3B01G525100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Bax_inhibitor_1-related | InterPro:Homeobox_Antennapedia_CS | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF48 | PFAM:PF01027 |
| ScanProsite:PS00032 | SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3B:-:766790703..766792444
Molecular Weight (calculated)
27972.2 Da
IEP (calculated)
9.179
GRAVY (calculated)
0.960
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRHQKGGDI EAGTSGGTAM APPPAPAQVL YPWMAESPEL RWALIRKIYV ILSLQLLLTA VVAAVVVKVW AIPHFFVSSY AGLGLYISIL IFPFIVLCPL
101: YCYRQKHPVN LLLLGVFTVA ISFAVGMTCA FTSGKVILEA AILTMVVVLS LTAYTFWAVK KGKDFSFLGP FLFASLVMLL VFGFIQILFP LGKLSHMIYG
201: ALAALIFSGY IVYDTGNIIK RYTYDEYVWA AVSLYLDIIN LFLALLTLFR AGDS
101: YCYRQKHPVN LLLLGVFTVA ISFAVGMTCA FTSGKVILEA AILTMVVVLS LTAYTFWAVK KGKDFSFLGP FLFASLVMLL VFGFIQILFP LGKLSHMIYG
201: ALAALIFSGY IVYDTGNIIK RYTYDEYVWA AVSLYLDIIN LFLALLTLFR AGDS
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.