Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G393600.1 | Wheat | golgi, plasma membrane, vacuole | 100.0 | 100.0 |
| TraesCS5A01G384100.1 | Wheat | golgi, plasma membrane, vacuole | 99.6 | 99.6 |
| HORVU5Hr1G094490.1 | Barley | golgi, plasma membrane, vacuole | 99.2 | 99.2 |
| Os03t0745600-01 | Rice | golgi, plasma membrane, vacuole | 95.58 | 95.58 |
| HORVU5Hr1G044320.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 28.92 | 93.51 |
| Zm00001d033990_P001 | Maize | plasma membrane | 91.57 | 91.2 |
| EER93471 | Sorghum | plasma membrane | 91.16 | 90.8 |
| Zm00001d013289_P001 | Maize | plasma membrane | 90.76 | 90.4 |
| HORVU5Hr1G037150.1 | Barley | golgi, plastid | 75.9 | 75.3 |
| TraesCS3B01G526300.1 | Wheat | plasma membrane | 69.48 | 71.49 |
| TraesCS3B01G525800.1 | Wheat | plasma membrane | 71.49 | 71.49 |
| TraesCS3B01G525200.1 | Wheat | plasma membrane | 69.08 | 69.92 |
| TraesCS2B01G463300.1 | Wheat | plasma membrane | 67.87 | 68.42 |
| TraesCS3B01G526500.1 | Wheat | plasma membrane | 67.07 | 67.34 |
| TraesCS3B01G525100.1 | Wheat | nucleus | 68.67 | 67.32 |
| TraesCS5B01G440600.1 | Wheat | peroxisome, plasma membrane, vacuole | 65.86 | 67.21 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 53.41 | 54.06 |
| TraesCS3B01G526400.1 | Wheat | plasma membrane | 52.21 | 51.59 |
| TraesCS1B01G262200.1 | Wheat | peroxisome | 48.59 | 46.18 |
| HORVU3Hr1G104710.1 | Barley | extracellular, peroxisome, plastid | 44.98 | 45.16 |
| HORVU3Hr1G104660.1 | Barley | cytosol | 43.37 | 43.37 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G388900.1 | EnsemblPlantsGene:TraesCS5B01G388900 | InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF48 | PFAM:PF01027 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:567873934..567874799
Molecular Weight (calculated)
27876.8 Da
IEP (calculated)
8.394
GRAVY (calculated)
0.961
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MYFRPPPKGP EWGGDAEAGQ AARPLYPMML ESPQLRWAFV RKVYTILSIQ MLLTIAVASV VVFVRPVALF FVSSPAGFGL YIFLIILPFI VLCPLYYYYQ
101: RHPVNLLLLA LFTVAISFAV GLTCAFTKGE VILESAILTA VVVVSLTAYT FWAARRGHDF SFLGPFLFAA VMILMVFALI QAFFPLGRIS LMVYGGLAAL
201: VFCGYIIYDT DNLIKRYSYD EYVWAAVALY LDVINLFLSL LTLFRASDS
101: RHPVNLLLLA LFTVAISFAV GLTCAFTKGE VILESAILTA VVVVSLTAYT FWAARRGHDF SFLGPFLFAA VMILMVFALI QAFFPLGRIS LMVYGGLAAL
201: VFCGYIIYDT DNLIKRYSYD EYVWAAVALY LDVINLFLSL LTLFRASDS
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.