Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES10004 | Sorghum | peroxisome | 65.5 | 62.36 |
| Zm00001d052964_P002 | Maize | plasma membrane | 65.12 | 58.95 |
| Solyc09g065610.1.1 | Tomato | extracellular | 13.18 | 58.62 |
| PGSC0003DMT400049703 | Potato | plasma membrane | 47.67 | 50.83 |
| Bra018534.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 43.02 | 50.23 |
| Os03t0795800-01 | Rice | plasma membrane | 45.74 | 48.96 |
| Os07t0177200-01 | Rice | mitochondrion | 42.25 | 48.88 |
| Os07t0177300-01 | Rice | plasma membrane, plastid | 46.12 | 48.77 |
| CDY16255 | Canola | plasma membrane | 44.57 | 48.12 |
| VIT_07s0151g00280.t01 | Wine grape | plasma membrane | 41.09 | 47.96 |
| AT4G14730.1 | Thale cress | plasma membrane | 43.41 | 47.66 |
| CDY29762 | Canola | plasma membrane | 43.8 | 47.28 |
| Bra036891.1-P | Field mustard | plasma membrane | 43.8 | 47.28 |
| Os03t0745600-01 | Rice | golgi, plasma membrane, vacuole | 45.35 | 46.99 |
| PGSC0003DMT400051889 | Potato | plasma membrane | 44.57 | 46.94 |
| Bra040445.1-P | Field mustard | plasma membrane | 43.41 | 46.86 |
| CDY53716 | Canola | plasma membrane | 43.41 | 46.86 |
| Solyc06g084130.2.1 | Tomato | plasma membrane | 45.74 | 46.83 |
| CDX93913 | Canola | plasma membrane | 43.02 | 46.44 |
| AT3G63310.1 | Thale cress | plasma membrane | 43.02 | 46.44 |
| CDX97282 | Canola | plasma membrane | 44.57 | 46.37 |
| CDX91308 | Canola | plasma membrane | 44.57 | 46.37 |
| KRH32057 | Soybean | plasma membrane | 43.41 | 46.28 |
| Os03t0795600-01 | Rice | plasma membrane | 44.19 | 46.15 |
| VIT_05s0020g04030.t01 | Wine grape | plasma membrane | 39.15 | 45.7 |
| AT4G02690.1 | Thale cress | plasma membrane | 43.8 | 45.56 |
| AT1G03070.3 | Thale cress | plasma membrane | 43.41 | 45.34 |
| KRG95577 | Soybean | plasma membrane | 41.86 | 44.44 |
| Bra033373.1-P | Field mustard | plasma membrane | 41.86 | 44.08 |
| CDX89914 | Canola | plasma membrane | 41.47 | 43.67 |
| CDY18147 | Canola | plasma membrane | 41.86 | 43.55 |
| KRH35929 | Soybean | plasma membrane | 39.92 | 42.74 |
| KRG90848 | Soybean | plasma membrane | 39.53 | 42.15 |
| PGSC0003DMT400016496 | Potato | cytosol, golgi, peroxisome | 38.37 | 40.91 |
| KRH71378 | Soybean | mitochondrion | 44.19 | 40.28 |
| Solyc09g082590.2.1 | Tomato | cytosol, golgi, peroxisome | 37.21 | 39.67 |
| CDY28900 | Canola | extracellular | 10.08 | 39.39 |
| Os05t0402300-02 | Rice | plasma membrane | 36.82 | 35.98 |
| CDX98559 | Canola | mitochondrion, plasma membrane | 15.12 | 26.35 |
| Bra031411.1-P | Field mustard | plastid | 17.83 | 24.6 |
| CDY49039 | Canola | plastid | 17.05 | 23.91 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4350786 | ProteinID:ABA94549.2 | EMBL:AK069449 | ProteinID:BAF28517.1 | ProteinID:BAT14607.1 |
| InterPro:Bax_inhibitor_1-related | ProteinID:EEE52341.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:Os11g0581900 |
| EnsemblPlants:Os11t0581900-01 | PFAM:PF01027 | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF39 | UniProt:Q2R230 | TMHMM:TMhelix |
| UniParc:UPI0000D89B49 | RefSeq:XP_015615375.1 | SEG:seg | : | : | : |
Description
Uncharacterised protein family UPF0005 domain containing protein. (Os11t0581900-01)
Coordinates
chr11:+:21982349..21986403
Molecular Weight (calculated)
28402.5 Da
IEP (calculated)
8.568
GRAVY (calculated)
0.845
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKAEAAAAG DAAKPDPEMG VAGEKEVVAE KAPARRKVAA EEEDPRLRWA FVRKVYCILA LQFAVTAAIA VVAWAVRPIP RFFAAGSLAS WLVYLAILLC
101: PFIVLWPMLK YREKHPVNLL LLGLFTLCES LTIAVCSSTF LGKVVLQAAI LTAVAVIGLT IFTFWAAHRG HDFTFMYPFL AASLLVLLAY LIIQICFPLG
201: RAGMTIYGCL ATVLFSAFIV FDTNQLIKRH TYNEYVIAAI SLYLDVINLF MAQLSFSI
101: PFIVLWPMLK YREKHPVNLL LLGLFTLCES LTIAVCSSTF LGKVVLQAAI LTAVAVIGLT IFTFWAAHRG HDFTFMYPFL AASLLVLLAY LIIQICFPLG
201: RAGMTIYGCL ATVLFSAFIV FDTNQLIKRH TYNEYVIAAI SLYLDVINLF MAQLSFSI
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.