Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033373.1-P | Field mustard | plasma membrane | 92.31 | 93.06 |
| CDX89914 | Canola | plasma membrane | 91.9 | 92.65 |
| CDY18147 | Canola | plasma membrane | 92.31 | 91.94 |
| Solyc09g065610.1.1 | Tomato | extracellular | 19.84 | 84.48 |
| AT4G02690.1 | Thale cress | plasma membrane | 83.4 | 83.06 |
| PGSC0003DMT400049703 | Potato | plasma membrane | 79.35 | 80.99 |
| AT3G63310.1 | Thale cress | plasma membrane | 77.73 | 80.33 |
| KRH32057 | Soybean | plasma membrane | 76.11 | 77.69 |
| KRH71378 | Soybean | mitochondrion | 77.33 | 67.49 |
| GSMUA_Achr9P10630_001 | Banana | plasma membrane | 57.09 | 58.02 |
| EER90743 | Sorghum | plasma membrane | 55.47 | 55.47 |
| AT4G14730.1 | Thale cress | plasma membrane | 51.82 | 54.47 |
| Os03t0795600-01 | Rice | plasma membrane | 53.44 | 53.44 |
| Zm00001d034431_P001 | Maize | plasma membrane | 53.44 | 53.01 |
| GSMUA_Achr8P20490_001 | Banana | peroxisome, plasma membrane, vacuole | 51.42 | 52.05 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 51.82 | 52.03 |
| TraesCS5A01G437700.1 | Wheat | plasma membrane | 51.01 | 51.85 |
| TraesCS5D01G444900.1 | Wheat | plasma membrane | 51.42 | 51.84 |
| Os07t0177200-01 | Rice | mitochondrion | 45.75 | 50.67 |
| AT4G15470.1 | Thale cress | plasma membrane | 52.23 | 50.39 |
| Os11t0581900-01 | Rice | plasma membrane | 45.34 | 43.41 |
| EES10004 | Sorghum | peroxisome | 44.53 | 40.59 |
| Zm00001d052964_P002 | Maize | plasma membrane | 44.53 | 38.6 |
Protein Annotations
| MapMan:35.1 | EntrezGene:839581 | ProteinID:AAD25802.1 | ProteinID:AEE27524.1 | ProteinID:AEE27525.1 | EMBL:AK175449 |
| ProteinID:ANM58047.1 | ArrayExpress:AT1G03070 | EnsemblPlantsGene:AT1G03070 | RefSeq:AT1G03070 | TAIR:AT1G03070 | RefSeq:AT1G03070-TAIR-G |
| EnsemblPlants:AT1G03070.3 | Unigene:At.42562 | EMBL:BT010903 | InterPro:Bax_inhibitor_1-related | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_001184896.1 | RefSeq:NP_001320512.1 | RefSeq:NP_171806.1 | PFAM:PF01027 | PANTHER:PTHR23291 |
| PANTHER:PTHR23291:SF31 | UniProt:Q9SA63 | TMHMM:TMhelix | UniParc:UPI00000AA5C9 | SEG:seg | : |
Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
Coordinates
chr1:+:729830..731565
Molecular Weight (calculated)
27883.8 Da
IEP (calculated)
8.258
GRAVY (calculated)
0.921
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.