Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018534.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 78.63 | 88.24 |
| CDX91308 | Canola | plasma membrane | 86.69 | 86.69 |
| CDX97282 | Canola | plasma membrane | 86.69 | 86.69 |
| AT1G03070.3 | Thale cress | plasma membrane | 83.06 | 83.4 |
| Solyc09g065610.1.1 | Tomato | extracellular | 18.55 | 79.31 |
| AT3G63310.1 | Thale cress | plasma membrane | 75.0 | 77.82 |
| PGSC0003DMT400049703 | Potato | plasma membrane | 75.4 | 77.27 |
| KRH32057 | Soybean | plasma membrane | 72.98 | 74.79 |
| KRH71378 | Soybean | mitochondrion | 74.19 | 65.02 |
| GSMUA_Achr9P10630_001 | Banana | plasma membrane | 53.23 | 54.32 |
| AT4G14730.1 | Thale cress | plasma membrane | 50.0 | 52.77 |
| EER90743 | Sorghum | plasma membrane | 51.61 | 51.82 |
| Os03t0795600-01 | Rice | plasma membrane | 50.81 | 51.01 |
| Zm00001d034431_P001 | Maize | plasma membrane | 51.21 | 51.0 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 49.6 | 50.0 |
| TraesCS5D01G444900.1 | Wheat | plasma membrane | 49.19 | 49.8 |
| TraesCS5A01G437700.1 | Wheat | plasma membrane | 48.79 | 49.79 |
| Os07t0177200-01 | Rice | mitochondrion | 44.76 | 49.78 |
| GSMUA_Achr8P20490_001 | Banana | peroxisome, plasma membrane, vacuole | 47.58 | 48.36 |
| AT4G15470.1 | Thale cress | plasma membrane | 49.6 | 48.05 |
| Os11t0581900-01 | Rice | plasma membrane | 45.56 | 43.8 |
| EES10004 | Sorghum | peroxisome | 44.35 | 40.59 |
| Zm00001d052964_P002 | Maize | plasma membrane | 44.35 | 38.6 |
Protein Annotations
| MapMan:35.1 | EntrezGene:828203 | ProteinID:AAC78271.1 | ProteinID:AEE82214.1 | ArrayExpress:AT4G02690 | EnsemblPlantsGene:AT4G02690 |
| RefSeq:AT4G02690 | TAIR:AT4G02690 | RefSeq:AT4G02690-TAIR-G | EnsemblPlants:AT4G02690.1 | TAIR:AT4G02690.1 | EMBL:AY735633 |
| EMBL:AY735634 | EMBL:AY924811 | InterPro:Bax_inhibitor_1-related | ProteinID:CAB77754.1 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_192178.1 | PFAM:PF01027 | PO:PO:0001078 | PO:PO:0009009 | PO:PO:0020100 |
| PANTHER:PTHR23291 | PANTHER:PTHR23291:SF31 | UniProt:Q9ZQX7 | TMHMM:TMhelix | UniParc:UPI00000488E9 | SEG:seg |
Description
LFG3Protein LIFEGUARD 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQX7]
Coordinates
chr4:+:1185751..1187816
Molecular Weight (calculated)
28222.4 Da
IEP (calculated)
8.968
GRAVY (calculated)
0.906
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQWNLPYRK DDVETGVSSR RPLLYPAMHE NPELRWGFIR KVYSIIAFQL LATVAVAATV VTVRPIALFF ATTGLGLALY IVIIITPLIV LCPLYYYHQK
101: HPVNYLLLGI FTLALAFVVG LTCAFTNGKV ILESVILTSV VVLSLTLYTF WAARKGYDFN FLGPFLFGAL TVLIFFALIQ ILFPLGRVSV MIYGCLVSII
201: FCGYIVYDTD NLIKRHTYDE YIWAAVSLYL DIINLFLYLL TVLRALQR
101: HPVNYLLLGI FTLALAFVVG LTCAFTNGKV ILESVILTSV VVLSLTLYTF WAARKGYDFN FLGPFLFGAL TVLIFFALIQ ILFPLGRVSV MIYGCLVSII
201: FCGYIVYDTD NLIKRHTYDE YIWAAVSLYL DIINLFLYLL TVLRALQR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.