CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
peroxisome 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052964_P002	Maize	plasma membrane	80.44	76.49
Os11t0581900-01	Rice	plasma membrane	62.36	65.5
Solyc09g065610.1.1	Tomato	extracellular	11.81	55.17
EER98056	Sorghum	plasma membrane	45.02	49.19
PGSC0003DMT400049703	Potato	plasma membrane	43.54	48.76
CDY53716	Canola	plasma membrane	42.8	48.54
Bra018534.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	39.48	48.42
Bra040445.1-P	Field mustard	plasma membrane	42.44	48.12
CDX93913	Canola	plasma membrane	42.44	48.12
VIT_07s0151g00280.t01	Wine grape	plasma membrane	39.11	47.96
KRG95577	Soybean	plasma membrane	42.07	46.91
CDY16255	Canola	plasma membrane	41.33	46.86
CDY29762	Canola	plasma membrane	40.96	46.44
AT3G63310.1	Thale cress	plasma membrane	40.59	46.03
Bra036891.1-P	Field mustard	plasma membrane	40.59	46.03
EER90743	Sorghum	plasma membrane	41.7	45.75
EER90742	Sorghum	golgi, plasma membrane, vacuole	40.96	45.68
EER93471	Sorghum	plasma membrane	42.07	45.6
VIT_05s0020g04030.t01	Wine grape	plasma membrane	36.9	45.25
CDX97282	Canola	plasma membrane	41.33	45.16
CDX91308	Canola	plasma membrane	41.33	45.16
AT4G14730.1	Thale cress	plasma membrane	39.11	45.11
AT1G03070.3	Thale cress	plasma membrane	40.59	44.53
AT4G02690.1	Thale cress	plasma membrane	40.59	44.35
KRH32057	Soybean	plasma membrane	39.11	43.8
Bra033373.1-P	Field mustard	plasma membrane	39.11	43.27
CDX89914	Canola	plasma membrane	38.75	42.86
PGSC0003DMT400051889	Potato	plasma membrane	38.75	42.86
CDY18147	Canola	plasma membrane	38.75	42.34
Solyc06g084130.2.1	Tomato	plasma membrane	39.11	42.06
KRG90848	Soybean	plasma membrane	36.9	41.32
KRH35929	Soybean	plasma membrane	36.53	41.08
PGSC0003DMT400016496	Potato	cytosol, golgi, peroxisome	35.42	39.67
CDY28900	Canola	extracellular	9.59	39.39
KXG21947	Sorghum	plasma membrane	36.53	37.5
KRH71378	Soybean	mitochondrion	39.11	37.46
Solyc09g082590.2.1	Tomato	cytosol, golgi, peroxisome	32.84	36.78
CDX98559	Canola	mitochondrion, plasma membrane	14.39	26.35
Bra031411.1-P	Field mustard	plastid	16.61	24.06
CDY49039	Canola	plastid	16.24	23.91

Protein Annotations

EnsemblPlants:EES10004	EnsemblPlantsGene:SORBI_3005G166100	EntrezGene:8062666	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF39	PFAM:PF01027	ProteinID:EES10004	ProteinID:EES10004.1
RefSeq:XP_002451016.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001A86C4D	UniProt:C5Y5A4	MapMan:35.1

Description

hypothetical protein

Coordinates

chr5:-:64300036..64302507

Molecular Weight (calculated)

29427.6 Da

IEP (calculated)

9.356

GRAVY (calculated)

0.790

Length

271 amino acids

Sequence
(BLAST)

001: METPSAARDL EAAVPAAPAA AAAAKAEPKA AAVAGKAEQE KQAAPAAKKV AEEEDPRLRW AFVRKVYAIL SLQFALTAAV ATVACLVRPI PRFFAVGPPA
101: AVWPTFIVIL VSPLIVMFPM LKYREKHPRN LVLLALFTLC CSLSIAVSAS TTFGTVVLQA TILTASSVVG LTLFTFLAVK RGYDFSFTFP FLFTSLLVLL
201: VYITIQICFP LGRVAMTIYG FLATVVFSGF IVYDTNMLLK RHTYNEYVVA AISLYLDVIN LFMAQMSLSC H

Best Arabidopsis Sequence Match ( AT1G03070.1 )
(BLAST)

001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE

Arabidopsis Description

LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.