Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- extracellular 4
- golgi 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_10s0003g01830.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14730.1 | VIT_10s0003g01830.t01 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0151g00280.t01 | Wine grape | plasma membrane | 61.09 | 61.09 |
| Os07t0177200-01 | Rice | mitochondrion | 53.85 | 53.36 |
| CDY16255 | Canola | plasma membrane | 54.3 | 50.21 |
| GSMUA_Achr9P10630_001 | Banana | plasma membrane | 54.75 | 49.79 |
| Bra036891.1-P | Field mustard | plasma membrane | 53.85 | 49.79 |
| CDY29762 | Canola | plasma membrane | 53.85 | 49.79 |
| AT4G14730.1 | Thale cress | plasma membrane | 52.94 | 49.79 |
| KRH35929 | Soybean | plasma membrane | 53.39 | 48.96 |
| VIT_05s0020g02430.t01 | Wine grape | golgi, peroxisome, plasma membrane | 53.39 | 48.96 |
| KRG90848 | Soybean | plasma membrane | 52.94 | 48.35 |
| EER90743 | Sorghum | plasma membrane | 53.85 | 48.18 |
| GSMUA_Achr8P20490_001 | Banana | peroxisome, plasma membrane, vacuole | 52.94 | 47.95 |
| Os03t0795600-01 | Rice | plasma membrane | 52.04 | 46.56 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 50.23 | 45.12 |
| Zm00001d034431_P001 | Maize | plasma membrane | 50.68 | 44.98 |
| TraesCS5D01G444900.1 | Wheat | plasma membrane | 49.77 | 44.9 |
| TraesCS5A01G437700.1 | Wheat | plasma membrane | 48.87 | 44.44 |
| Os11t0581900-01 | Rice | plasma membrane | 45.7 | 39.15 |
| PGSC0003DMT400016496 | Potato | cytosol, golgi, peroxisome | 41.63 | 38.02 |
| EES10004 | Sorghum | peroxisome | 45.25 | 36.9 |
| Solyc09g082590.2.1 | Tomato | cytosol, golgi, peroxisome | 40.27 | 36.78 |
| Zm00001d052964_P002 | Maize | plasma membrane | 44.8 | 34.74 |
Protein Annotations
| EntrezGene:100251154 | wikigene:100251154 | MapMan:35.1 | InterPro:Bax_inhibitor_1-related | ProteinID:CBI26304 | ProteinID:CBI26304.3 |
| UniProt:D7T733 | EMBL:FN595749 | GO:GO:0005575 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008219 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0050832 |
| GO:GO:0060548 | EntrezGene:LOC100251154 | wikigene:LOC100251154 | PFAM:PF01027 | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF31 |
| TMHMM:TMhelix | UniParc:UPI0001BE2D81 | ArrayExpress:VIT_05s0020g04030 | EnsemblPlantsGene:VIT_05s0020g04030 | EnsemblPlants:VIT_05s0020g04030.t01 | RefSeq:XP_002283304 |
| RefSeq:XP_002283304.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:5713010..5714251
Molecular Weight (calculated)
24679.5 Da
IEP (calculated)
8.064
GRAVY (calculated)
1.166
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MLESPPMRWA FIRKVYAILS MQLLLTVVVA AIVVVVDPIS DFMVHNRAGL GLYLFIVVLS LILMCALAAF HKRHPVNLIL LGMFTLTMAF TMGLSCAFVK
101: GKIILEAAIL TSVVTIGLTL YTFWAAKRGH DFSFLGPFLF ASLLVLLVFS MIQMFFPMGK LSTMIFGCLG AIIFSGFIIY DTDNMIKRYE YDDFIWAAVS
201: LYLDILNLFI ALINILTASD S
101: GKIILEAAIL TSVVTIGLTL YTFWAAKRGH DFSFLGPFLF ASLLVLLVFS MIQMFFPMGK LSTMIFGCLG AIIFSGFIIY DTDNMIKRYE YDDFIWAAVS
201: LYLDILNLFI ALINILTASD S
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.