Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29762 | Canola | plasma membrane | 75.74 | 74.48 |
| Bra036891.1-P | Field mustard | plasma membrane | 74.89 | 73.64 |
| CDY16255 | Canola | plasma membrane | 74.47 | 73.22 |
| AT3G63310.1 | Thale cress | plasma membrane | 54.04 | 53.14 |
| VIT_05s0020g04030.t01 | Wine grape | plasma membrane | 49.79 | 52.94 |
| AT1G03070.3 | Thale cress | plasma membrane | 54.47 | 51.82 |
| AT4G02690.1 | Thale cress | plasma membrane | 52.77 | 50.0 |
| GSMUA_Achr9P10630_001 | Banana | plasma membrane | 51.06 | 49.38 |
| KRH35929 | Soybean | plasma membrane | 49.79 | 48.55 |
| KRG90848 | Soybean | plasma membrane | 49.36 | 47.93 |
| GSMUA_Achr8P20490_001 | Banana | peroxisome, plasma membrane, vacuole | 48.94 | 47.13 |
| Os07t0177200-01 | Rice | mitochondrion | 44.68 | 47.09 |
| EER90743 | Sorghum | plasma membrane | 49.36 | 46.96 |
| Os03t0795600-01 | Rice | plasma membrane | 47.66 | 45.34 |
| Zm00001d034431_P001 | Maize | plasma membrane | 47.66 | 44.98 |
| TraesCS5A01G437700.1 | Wheat | plasma membrane | 46.38 | 44.86 |
| AT4G15470.1 | Thale cress | plasma membrane | 48.51 | 44.53 |
| TraesCS5D01G444900.1 | Wheat | plasma membrane | 46.38 | 44.49 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 46.38 | 44.31 |
| Os11t0581900-01 | Rice | plasma membrane | 47.66 | 43.41 |
| PGSC0003DMT400016496 | Potato | cytosol, golgi, peroxisome | 42.55 | 41.32 |
| Solyc09g082590.2.1 | Tomato | cytosol, golgi, peroxisome | 41.7 | 40.5 |
| EES10004 | Sorghum | peroxisome | 45.11 | 39.11 |
| Zm00001d052964_P002 | Maize | plasma membrane | 43.4 | 35.79 |
Protein Annotations
| MapMan:35.1 | EntrezGene:827126 | ProteinID:AEE83489.1 | ArrayExpress:AT4G14730 | EnsemblPlantsGene:AT4G14730 | RefSeq:AT4G14730 |
| TAIR:AT4G14730 | RefSeq:AT4G14730-TAIR-G | EnsemblPlants:AT4G14730.1 | TAIR:AT4G14730.1 | EMBL:BT010801 | EMBL:BT011269 |
| InterPro:Bax_inhibitor_1-related | ProteinID:CAB10252.1 | ProteinID:CAB78515.1 | UniProt:F4JIE8 | GO:GO:0005575 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008219 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0050832 | GO:GO:0060548 | RefSeq:NP_193209.2 | PFAM:PF01027 |
| PANTHER:PTHR23291 | PANTHER:PTHR23291:SF31 | TMHMM:TMhelix | UniParc:UPI000034F08F | SEG:seg | : |
Description
LFG1Protein LIFEGUARD 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JIE8]
Coordinates
chr4:+:8448366..8450174
Molecular Weight (calculated)
26273.1 Da
IEP (calculated)
8.309
GRAVY (calculated)
0.958
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSDIETGG GNELYPGMKE SSELRWAFIR KLYSILSLQL LVTVGVSAVV YFVRPIPEFI TETHRGLAVF FVILLLPLLL LWPLLAFEKK HPINCIVLSI
101: FTLSISFSVG ICCSLSQGRI VLEAAILTAV MVFGLTIYTF WAVKRGHDFS FLGPFLFGAL LIILVFTLLQ IFHPLGKLSS MIFSGIASIV FCGYIIFDTN
201: QLIKKLNYDE YITAAIRLYL DVMNLFLSLL GIISN
101: FTLSISFSVG ICCSLSQGRI VLEAAILTAV MVFGLTIYTF WAVKRGHDFS FLGPFLFGAL LIILVFTLLQ IFHPLGKLSS MIFSGIASIV FCGYIIFDTN
201: QLIKKLNYDE YITAAIRLYL DVMNLFLSLL GIISN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.