Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034431_P001 | Maize | plasma membrane | 85.83 | 85.14 |
| Os03t0795600-01 | Rice | plasma membrane | 64.78 | 64.78 |
| TraesCS5A01G437700.1 | Wheat | plasma membrane | 63.16 | 64.2 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 63.56 | 63.82 |
| TraesCS5D01G444900.1 | Wheat | plasma membrane | 63.16 | 63.67 |
| Solyc09g065610.1.1 | Tomato | extracellular | 14.57 | 62.07 |
| VIT_07s0151g00280.t01 | Wine grape | plasma membrane | 53.85 | 60.18 |
| GSMUA_Achr8P20490_001 | Banana | peroxisome, plasma membrane, vacuole | 58.7 | 59.43 |
| GSMUA_Achr9P10630_001 | Banana | plasma membrane | 57.89 | 58.85 |
| EER93471 | Sorghum | plasma membrane | 59.11 | 58.4 |
| CDX93913 | Canola | plasma membrane | 55.87 | 57.74 |
| Bra040445.1-P | Field mustard | plasma membrane | 55.47 | 57.32 |
| CDY53716 | Canola | plasma membrane | 55.47 | 57.32 |
| AT3G63310.1 | Thale cress | plasma membrane | 54.25 | 56.07 |
| Bra033373.1-P | Field mustard | plasma membrane | 55.47 | 55.92 |
| KRH32057 | Soybean | plasma membrane | 54.66 | 55.79 |
| CDX89914 | Canola | plasma membrane | 55.06 | 55.51 |
| AT1G03070.3 | Thale cress | plasma membrane | 55.47 | 55.47 |
| CDY18147 | Canola | plasma membrane | 55.47 | 55.24 |
| EER90742 | Sorghum | golgi, plasma membrane, vacuole | 53.85 | 54.73 |
| PGSC0003DMT400049703 | Potato | plasma membrane | 53.44 | 54.55 |
| PGSC0003DMT400051889 | Potato | plasma membrane | 53.44 | 53.88 |
| VIT_05s0020g04030.t01 | Wine grape | plasma membrane | 48.18 | 53.85 |
| Bra018534.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 48.18 | 53.85 |
| KRG95577 | Soybean | plasma membrane | 52.23 | 53.09 |
| Solyc06g084130.2.1 | Tomato | plasma membrane | 53.04 | 51.98 |
| EER98056 | Sorghum | plasma membrane | 51.82 | 51.61 |
| AT4G02690.1 | Thale cress | plasma membrane | 51.82 | 51.61 |
| CDX97282 | Canola | plasma membrane | 50.61 | 50.4 |
| CDX91308 | Canola | plasma membrane | 50.61 | 50.4 |
| CDY29762 | Canola | plasma membrane | 47.77 | 49.37 |
| AT4G14730.1 | Thale cress | plasma membrane | 46.96 | 49.36 |
| CDY16255 | Canola | plasma membrane | 47.37 | 48.95 |
| Bra036891.1-P | Field mustard | plasma membrane | 47.37 | 48.95 |
| KRH35929 | Soybean | plasma membrane | 47.37 | 48.55 |
| KRG90848 | Soybean | plasma membrane | 46.96 | 47.93 |
| KRH71378 | Soybean | mitochondrion | 54.66 | 47.7 |
| CDY28900 | Canola | extracellular | 11.74 | 43.94 |
| Solyc09g082590.2.1 | Tomato | cytosol, golgi, peroxisome | 42.11 | 42.98 |
| PGSC0003DMT400016496 | Potato | cytosol, golgi, peroxisome | 41.3 | 42.15 |
| EES10004 | Sorghum | peroxisome | 45.75 | 41.7 |
| KXG21947 | Sorghum | plasma membrane | 42.51 | 39.77 |
| CDX98559 | Canola | mitochondrion, plasma membrane | 16.19 | 27.03 |
| Bra031411.1-P | Field mustard | plastid | 18.62 | 24.6 |
| CDY49039 | Canola | plastid | 18.22 | 24.46 |
Protein Annotations
| EnsemblPlants:EER90743 | EnsemblPlantsGene:SORBI_3001G057900 | EntrezGene:8061174 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF44 | PFAM:PF01027 | ProteinID:EER90743 | ProteinID:EER90743.1 |
| RefSeq:XP_002463745.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0001A82119 | UniProt:C5WX80 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr1:+:4379367..4380468
Molecular Weight (calculated)
26948.1 Da
IEP (calculated)
6.751
GRAVY (calculated)
1.035
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKHGKCSHD IEACYPPGAD GGMYPYMMES PQLRWAFIRK VYAIVCLQLL LTVAVAAAVN LVGPIADFFL SRTIGAIAAT IAVIIFPILV MIPMIIYRKR
101: HPVNLVLLAL FTVGISFAVG LSCLSAKGPV ILEAVVITMV VVLGLTAYTF WAAKQGYDFE FLGPFLVAAV LILMLFGLVR ILFPLGKTGT MVYGCIAALV
201: FSGFIIYDTD NLIKRYSYDE YVSAAIELYL DIINLFQAIL AILEGVD
101: HPVNLVLLAL FTVGISFAVG LSCLSAKGPV ILEAVVITMV VVLGLTAYTF WAAKQGYDFE FLGPFLVAAV LILMLFGLVR ILFPLGKTGT MVYGCIAALV
201: FSGFIIYDTD NLIKRYSYDE YVSAAIELYL DIINLFQAIL AILEGVD
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.