Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018534.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 89.11 | 100.0 |
| CDX97282 | Canola | plasma membrane | 99.6 | 99.6 |
| AT4G02690.1 | Thale cress | plasma membrane | 86.69 | 86.69 |
| CDX89914 | Canola | plasma membrane | 84.27 | 85.31 |
| CDY18147 | Canola | plasma membrane | 84.68 | 84.68 |
| Solyc09g065610.1.1 | Tomato | extracellular | 19.76 | 84.48 |
| PGSC0003DMT400049703 | Potato | plasma membrane | 75.81 | 77.69 |
| KRH32057 | Soybean | plasma membrane | 75.4 | 77.27 |
| CDX93913 | Canola | plasma membrane | 72.58 | 75.31 |
| CDY53716 | Canola | plasma membrane | 72.18 | 74.9 |
| CDY28900 | Canola | extracellular | 18.55 | 69.7 |
| KRH71378 | Soybean | mitochondrion | 76.61 | 67.14 |
| GSMUA_Achr9P10630_001 | Banana | plasma membrane | 53.63 | 54.73 |
| CDY16255 | Canola | plasma membrane | 50.4 | 52.3 |
| CDX90589 | Canola | golgi, peroxisome, plasma membrane | 53.63 | 52.16 |
| CDY09761 | Canola | golgi, peroxisome, plasma membrane | 53.63 | 51.95 |
| CDY09066 | Canola | golgi, peroxisome, plasma membrane | 53.63 | 51.95 |
| CDY29762 | Canola | plasma membrane | 50.0 | 51.88 |
| Os03t0795600-01 | Rice | plasma membrane | 50.81 | 51.01 |
| EER90743 | Sorghum | plasma membrane | 50.4 | 50.61 |
| Zm00001d034431_P001 | Maize | plasma membrane | 49.6 | 49.4 |
| CDY22739 | Canola | plasma membrane | 53.63 | 48.9 |
| TraesCS5B01G440500.1 | Wheat | plasma membrane | 48.39 | 48.78 |
| GSMUA_Achr8P20490_001 | Banana | peroxisome, plasma membrane, vacuole | 47.98 | 48.77 |
| TraesCS5D01G444900.1 | Wheat | plasma membrane | 47.98 | 48.57 |
| TraesCS5A01G437700.1 | Wheat | plasma membrane | 47.58 | 48.56 |
| Os07t0177200-01 | Rice | mitochondrion | 42.74 | 47.53 |
| CDX98559 | Canola | mitochondrion, plasma membrane | 26.61 | 44.59 |
| Os11t0581900-01 | Rice | plasma membrane | 46.37 | 44.57 |
| EES10004 | Sorghum | peroxisome | 45.16 | 41.33 |
| Zm00001d052964_P002 | Maize | plasma membrane | 45.97 | 40.0 |
| CDY49039 | Canola | plastid | 28.23 | 38.04 |
| CDY09067 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX91308 | EnsemblPlantsGene:GSBRNA2T00152568001 | GO:A0A078DVR0 | InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF31 |
| PFAM:PF01027 | ProteinID:CDX91308 | ProteinID:CDX91308.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE65F3 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC02g27190D
Coordinates
chrLK031866:+:1396724..1398088
Molecular Weight (calculated)
28111.0 Da
IEP (calculated)
9.117
GRAVY (calculated)
0.830
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQWNLPYRK DDLEAGGSSR SRPLYPTMHE TPELRWGFIR KVYSIIAFQL LATIAVSATV VTVRPIALFF ATTGAGLGLY IVIIITPFIV LCPLYYYHQK
101: HPVNYLLLGV FTLALAFVVG LTCAFTNGKV ILESAILTTV VVLSLTVYTF WAAKRGYDFN FLGPFLFGAL IVLVVFAMIQ VFFPLGRTSV MIYGFLASVI
201: FCGYIVYDTD NLIKRYTYDE YIWAAVSLYL DIINLFLSLL TIFRALQR
101: HPVNYLLLGV FTLALAFVVG LTCAFTNGKV ILESAILTTV VVLSLTVYTF WAAKRGYDFN FLGPFLFGAL IVLVVFAMIQ VFFPLGRTSV MIYGFLASVI
201: FCGYIVYDTD NLIKRYTYDE YIWAAVSLYL DIINLFLSLL TIFRALQR
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.