Factsheet for PGSC0003DMT400049703

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g065610.1.1	Tomato	extracellular	22.73	94.83
CDY53716	Canola	plasma membrane	82.23	83.26
CDX93913	Canola	plasma membrane	82.23	83.26
AT3G63310.1	Thale cress	plasma membrane	81.41	82.43
Bra040445.1-P	Field mustard	plasma membrane	81.41	82.43
KRH32057	Soybean	plasma membrane	80.17	80.17
PGSC0003DMT400051889	Potato	plasma membrane	80.99	80.0
Bra033373.1-P	Field mustard	plasma membrane	80.58	79.59
AT1G03070.3	Thale cress	plasma membrane	80.99	79.35
Bra018534.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	72.31	79.19
CDX89914	Canola	plasma membrane	80.17	79.18
CDY18147	Canola	plasma membrane	80.58	78.63
CDX91308	Canola	plasma membrane	77.69	75.81
CDX97282	Canola	plasma membrane	77.69	75.81
AT4G02690.1	Thale cress	plasma membrane	77.27	75.4
KRH71378	Soybean	mitochondrion	80.58	68.9
CDY28900	Canola	extracellular	16.53	60.61
GSMUA_Achr9P10630_001	Banana	plasma membrane	58.26	58.02
EER90743	Sorghum	plasma membrane	54.55	53.44
Os03t0795600-01	Rice	plasma membrane	54.13	53.04
PGSC0003DMT400035266	Potato	peroxisome	52.07	52.07
Os07t0177200-01	Rice	mitochondrion	47.93	52.02
GSMUA_Achr8P20490_001	Banana	peroxisome, plasma membrane, vacuole	52.07	51.64
TraesCS5B01G440500.1	Wheat	plasma membrane	52.48	51.63
TraesCS5A01G437700.1	Wheat	plasma membrane	51.65	51.44
TraesCS5D01G444900.1	Wheat	plasma membrane	52.07	51.43
PGSC0003DMT400033268	Potato	plasma membrane	52.07	51.22
Zm00001d034431_P001	Maize	plasma membrane	51.65	50.2
Os11t0581900-01	Rice	plasma membrane	50.83	47.67
PGSC0003DMT400016496	Potato	cytosol, golgi, peroxisome	46.69	46.69
EES10004	Sorghum	peroxisome	48.76	43.54
Zm00001d052964_P002	Maize	plasma membrane	46.69	39.65
CDX98559	Canola	mitochondrion, plasma membrane	23.55	38.51
Bra031411.1-P	Field mustard	plastid	26.86	34.76
CDY49039	Canola	plastid	26.03	34.24

Protein Annotations

EnsemblPlants:PGSC0003DMT400049703	EnsemblPlantsGene:PGSC0003DMG400019313	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Bax_inhibitor_1-related
PANTHER:PTHR23291	PANTHER:PTHR23291:SF31	PFAM:PF01027	PGSC:PGSC0003DMG400019313	TMHMM:TMhelix	UniParc:UPI0002965B9C
UniProt:M1BP72	MapMan:35.1	:	:	:	:

Description

Receptor associated protein [Source:PGSC_GENE;Acc:PGSC0003DMG400019313]

Coordinates

chr9:-:48184176..48187813

Molecular Weight (calculated)

27267.9 Da

IEP (calculated)

7.436

GRAVY (calculated)

0.945

Length

242 amino acids

Sequence
(BLAST)

001: MWNQAYRKDD VEFGTAPLYP AMLESPELRW SFIRKVYSII SIQLLLTIAV ASVVVTVHPI SHFFAATNAG LALYIVLIIT PFITLCPLYY YHQKHPVNYL
101: LLGLFTVSLA FTIGLTCAFT SGKVILEAVI LTTAVVISLT LYTFWAAKRG QDFNFLGPFL FGALIVLLLF SFIQILFPLG KISVMIYGCL ASIIFCGYIV
201: YDTDNLIKRY TYDEYIWAAI SLYLDVINLF LALLSIFRAA DS

Best Arabidopsis Sequence Match ( AT1G03070.2 )
(BLAST)

001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE

Arabidopsis Description

LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.