Factsheet for PGSC0003DMT400033268

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080330.2.1	Tomato	plasma membrane	98.78	98.78
VIT_05s0020g02430.t01	Wine grape	golgi, peroxisome, plasma membrane	78.46	80.08
KRH11337	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	74.39	74.39
KRH20943	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	73.98	73.98
Bra038082.1-P	Field mustard	golgi, peroxisome, plasma membrane	73.98	71.65
CDX90589	Canola	golgi, peroxisome, plasma membrane	73.58	70.98
Bra012786.1-P	Field mustard	plasma membrane	73.58	70.7
CDY09761	Canola	golgi, peroxisome, plasma membrane	73.58	70.7
CDY09066	Canola	golgi, peroxisome, plasma membrane	73.58	70.7
AT4G15470.1	Thale cress	plasma membrane	73.17	70.31
GSMUA_Achr8P21800_001	Banana	peroxisome, plasma membrane, vacuole	67.07	67.07
PGSC0003DMT400035266	Potato	peroxisome	65.85	66.94
GSMUA_Achr10P...	Banana	peroxisome	66.67	66.67
CDY22739	Canola	plasma membrane	73.17	66.18
GSMUA_Achr5P27390_001	Banana	plasma membrane	63.41	62.9
HORVU1Hr1G061500.2	Barley	peroxisome	60.98	57.25
Os05t0402300-02	Rice	plasma membrane	61.38	57.2
TraesCS1A01G251600.1	Wheat	peroxisome	60.16	56.49
Zm00001d038147_P001	Maize	plasma membrane	60.57	56.44
TraesCS1D01G251100.1	Wheat	golgi	59.76	56.11
TraesCS1B01G262200.1	Wheat	peroxisome	59.35	55.73
KXG21947	Sorghum	plasma membrane	59.76	55.68
PGSC0003DMT400051889	Potato	plasma membrane	52.44	52.65
PGSC0003DMT400049703	Potato	plasma membrane	51.22	52.07
PGSC0003DMT400016496	Potato	cytosol, golgi, peroxisome	38.21	38.84
CDY09067	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400033268	EnsemblPlantsGene:PGSC0003DMG400012777	EntrezGene:102605126	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF31	PFAM:PF01027	PGSC:PGSC0003DMG400012777	RefSeq:XP_006339425.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002969F0D	UniProt:M1AYV9	MapMan:35.1	:

Description

BI1 [Source:PGSC_GENE;Acc:PGSC0003DMG400012777]

Coordinates

chr1:-:61104199..61106597

Molecular Weight (calculated)

27300.7 Da

IEP (calculated)

5.726

GRAVY (calculated)

0.668

Length

246 amino acids

Sequence
(BLAST)

001: MYGFTSLSTE SDGGIKGDIE EGTLYPGLGY GENQLRWGFI RKVYGILAAQ ILLTTLVSAV TVLYTPINDL LRGSPGLLLL LVFLPFVLLW PLHIYQQKHP
101: LNFIFLGLFT ASLSLTVGVT CANTDGRIVL EALLLTSAVV SALTGYTFWA SKKGKDFSFL GPILFTSLFV LILTGFMQMF FPLGSTTSAV YSAMSAIIFC
201: GYIIYDTDNL IKRFTYDEYI WASVTLYLDV LNLFLTILRI LRQGDN

Best Arabidopsis Sequence Match ( AT4G15470.1 )
(BLAST)

001: MDKPYGYASV SMSGIDRSAG KDIDLEMGVG EATLYPGLSY GENQLRWGFI RKVYGILSAQ LLLTTLISAV VVLNPPVNDL LTGSPGILLF LCIVPFILIW
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN

Arabidopsis Description

LFG5BI1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94A20]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.