Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G262200.1 | Wheat | peroxisome | 99.62 | 99.62 |
| TraesCS1A01G251600.1 | Wheat | peroxisome | 99.62 | 99.62 |
| HORVU1Hr1G061500.2 | Barley | peroxisome | 98.86 | 98.86 |
| Zm00001d038147_P001 | Maize | plasma membrane | 82.44 | 81.82 |
| Os05t0402300-02 | Rice | plasma membrane | 81.68 | 81.06 |
| KXG21947 | Sorghum | plasma membrane | 81.3 | 80.68 |
| GSMUA_Achr8P21800_001 | Banana | peroxisome, plasma membrane, vacuole | 65.27 | 69.51 |
| GSMUA_Achr5P27390_001 | Banana | plasma membrane | 64.12 | 67.74 |
| GSMUA_Achr10P... | Banana | peroxisome | 62.98 | 67.07 |
| AT4G15470.1 | Thale cress | plasma membrane | 62.98 | 64.45 |
| Bra038082.1-P | Field mustard | golgi, peroxisome, plasma membrane | 61.45 | 63.39 |
| CDX90589 | Canola | golgi, peroxisome, plasma membrane | 61.45 | 63.14 |
| Bra012786.1-P | Field mustard | plasma membrane | 61.45 | 62.89 |
| CDY09066 | Canola | golgi, peroxisome, plasma membrane | 61.45 | 62.89 |
| CDY09761 | Canola | golgi, peroxisome, plasma membrane | 61.45 | 62.89 |
| VIT_05s0020g02430.t01 | Wine grape | golgi, peroxisome, plasma membrane | 57.63 | 62.66 |
| KRH20943 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 57.63 | 61.38 |
| KRH11337 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 57.25 | 60.98 |
| Solyc01g080330.2.1 | Tomato | plasma membrane | 56.11 | 59.76 |
| PGSC0003DMT400033268 | Potato | plasma membrane | 56.11 | 59.76 |
| CDY22739 | Canola | plasma membrane | 60.31 | 58.09 |
| PGSC0003DMT400035266 | Potato | peroxisome | 50.0 | 54.13 |
| Solyc07g042510.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 49.62 | 53.5 |
| TraesCS3D01G476400.1 | Wheat | plasma membrane | 46.18 | 51.05 |
| TraesCS5D01G445000.1 | Wheat | plasma membrane | 47.33 | 50.82 |
| TraesCS3D01G476300.1 | Wheat | plasma membrane | 46.18 | 49.39 |
| TraesCS3D01G476000.1 | Wheat | plasma membrane | 45.42 | 48.97 |
| TraesCS5D01G393600.1 | Wheat | golgi, plasma membrane, vacuole | 46.18 | 48.59 |
| TraesCS3D01G475300.1 | Wheat | plasma membrane | 46.56 | 48.41 |
| TraesCS3D01G476100.1 | Wheat | plasma membrane | 41.98 | 45.83 |
| TraesCS3D01G475900.1 | Wheat | peroxisome, plasma membrane, vacuole | 44.66 | 44.15 |
| TraesCS5D01G444900.1 | Wheat | plasma membrane | 39.31 | 42.04 |
| CDY09067 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G251100.1 | EnsemblPlantsGene:TraesCS1D01G251100 | InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF31 | PFAM:PF01027 |
| SEG:seg | TIGR:cd10429 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1D:-:343361720..343365254
Molecular Weight (calculated)
28781.4 Da
IEP (calculated)
6.669
GRAVY (calculated)
0.598
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MASATEMQPL APSGYRRAPE MKEKVEASSI DLEAGNGETL YPGISRGENA LRWGFIRKVY GILCAQLVLT TVVSAITVFH PTLNATLSNS PVLALVLAVL
101: PFILMIPLYI YQHRHPHNLA ILGLFTLCLS FSIGVACANT EGTIVLQALV LTSAVVVSLT AYTFWAAKKG KEFSYLGPFL FSALTILVVI SFTQIFFPFG
201: PASNAVIGGF GALVFSGFIV YDTENLIKRH TYDEYIWASV ELYLDILNLF LTILQMLRQN DN
101: PFILMIPLYI YQHRHPHNLA ILGLFTLCLS FSIGVACANT EGTIVLQALV LTSAVVVSLT AYTFWAAKKG KEFSYLGPFL FSALTILVVI SFTQIFFPFG
201: PASNAVIGGF GALVFSGFIV YDTENLIKRH TYDEYIWASV ELYLDILNLF LTILQMLRQN DN
001: MDKPYGYASV SMSGIDRSAG KDIDLEMGVG EATLYPGLSY GENQLRWGFI RKVYGILSAQ LLLTTLISAV VVLNPPVNDL LTGSPGILLF LCIVPFILIW
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN
Arabidopsis Description
LFG5BI1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94A20]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.