Factsheet for VIT_05s0020g02430.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	golgi
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080330.2.1	Tomato	plasma membrane	80.5	78.86
PGSC0003DMT400033268	Potato	plasma membrane	80.08	78.46
KRH20943	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	72.61	71.14
KRH11337	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	72.2	70.73
GSMUA_Achr10P...	Banana	peroxisome	71.78	70.33
GSMUA_Achr8P21800_001	Banana	peroxisome, plasma membrane, vacuole	71.78	70.33
Bra038082.1-P	Field mustard	golgi, peroxisome, plasma membrane	73.44	69.69
AT4G15470.1	Thale cress	plasma membrane	73.86	69.53
CDY09066	Canola	golgi, peroxisome, plasma membrane	73.44	69.14
CDY09761	Canola	golgi, peroxisome, plasma membrane	73.44	69.14
CDX90589	Canola	golgi, peroxisome, plasma membrane	73.03	69.02
Bra012786.1-P	Field mustard	plasma membrane	73.03	68.75
GSMUA_Achr5P27390_001	Banana	plasma membrane	67.63	65.73
CDY22739	Canola	plasma membrane	73.03	64.71
PGSC0003DMT400035266	Potato	peroxisome	63.9	63.64
Solyc07g042510.2.1	Tomato	cytosol, peroxisome, plasma membrane	61.83	61.32
HORVU1Hr1G061500.2	Barley	peroxisome	63.49	58.4
Os05t0402300-02	Rice	plasma membrane	63.9	58.33
TraesCS1A01G251600.1	Wheat	peroxisome	63.07	58.02
Zm00001d038147_P001	Maize	plasma membrane	63.49	57.95
TraesCS1D01G251100.1	Wheat	golgi	62.66	57.63
TraesCS1B01G262200.1	Wheat	peroxisome	62.24	57.25
KXG21947	Sorghum	plasma membrane	62.66	57.2
VIT_05s0020g04030.t01	Wine grape	plasma membrane	48.96	53.39
VIT_07s0151g00280.t01	Wine grape	plasma membrane	46.47	50.68
CDY09067	Canola	plastid	0.0	0.0

Protein Annotations

EntrezGene:100266616	wikigene:100266616	MapMan:35.1	InterPro:Bax_inhibitor_1-related	ProteinID:CBI26161	ProteinID:CBI26161.3
UniProt:D7T6P0	EMBL:FN595749	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100266616
wikigene:LOC100266616	PFAM:PF01027	PANTHER:PTHR23291	PANTHER:PTHR23291:SF31	TIGR:TC67306	TMHMM:TMhelix
UniParc:UPI00015C7FA7	ArrayExpress:VIT_05s0020g02430	EnsemblPlantsGene:VIT_05s0020g02430	EnsemblPlants:VIT_05s0020g02430.t01	unigene:Vvi.9246	RefSeq:XP_002279368
RefSeq:XP_002279368.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:-:4115617..4117534

Molecular Weight (calculated)

26643.8 Da

IEP (calculated)

6.520

GRAVY (calculated)

0.729

Length

241 amino acids

Sequence
(BLAST)

001: MYGFTSVSSK GDLEEGTLYP GLSYGENELR WGFIRKVYGI LAAQILLTTL VSSFTVLYSP LNLLLRGNSG LLLFLIFLPF ILLWPLHVYQ QRHPLNLIFL
101: GLFTVSMSLT VGVSCAKTDG RIVLEALILT SAVVSSLTGY TFWASKKGKD FSYLGPILFS SLIILILTGF IQTFFPLGST SVAVYGGLSA IIFSGYIVYD
201: TDNLIKRFTY DDYIWASVAL YLDILNLFIA IMEILRGGSD G

Best Arabidopsis Sequence Match ( AT4G15470.1 )
(BLAST)

001: MDKPYGYASV SMSGIDRSAG KDIDLEMGVG EATLYPGLSY GENQLRWGFI RKVYGILSAQ LLLTTLISAV VVLNPPVNDL LTGSPGILLF LCIVPFILIW
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN

Arabidopsis Description

LFG5BI1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94A20]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.