Factsheet for GSMUA_Achr10P01390_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
vacuole 2
mitochondrion 1
plastid 1
plasma membrane 3
golgi 2
extracellular 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	golgi, mitochondrion, plasma membrane, plastid, vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P21800_001	Banana	peroxisome, plasma membrane, vacuole	91.06	91.06
GSMUA_Achr5P27390_001	Banana	plasma membrane	81.71	81.05
VIT_05s0020g02430.t01	Wine grape	golgi, peroxisome, plasma membrane	70.33	71.78
Zm00001d038147_P001	Maize	plasma membrane	72.36	67.42
Os05t0402300-02	Rice	plasma membrane	72.36	67.42
Solyc01g080330.2.1	Tomato	plasma membrane	66.67	66.67
PGSC0003DMT400033268	Potato	plasma membrane	66.67	66.67
KXG21947	Sorghum	plasma membrane	71.54	66.67
HORVU1Hr1G061500.2	Barley	peroxisome	67.89	63.74
TraesCS1A01G251600.1	Wheat	peroxisome	67.48	63.36
TraesCS1D01G251100.1	Wheat	golgi	67.07	62.98
TraesCS1B01G262200.1	Wheat	peroxisome	66.67	62.6
PGSC0003DMT400035266	Potato	peroxisome	61.38	62.4
KRH20943	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	62.2	62.2
KRH11337	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	62.2	62.2
Bra038082.1-P	Field mustard	golgi, peroxisome, plasma membrane	63.82	61.81
CDX90589	Canola	golgi, peroxisome, plasma membrane	63.82	61.57
CDY09761	Canola	golgi, peroxisome, plasma membrane	63.82	61.33
Bra012786.1-P	Field mustard	plasma membrane	63.82	61.33
CDY09066	Canola	golgi, peroxisome, plasma membrane	63.82	61.33
AT4G15470.1	Thale cress	plasma membrane	63.41	60.94
Solyc07g042510.2.1	Tomato	cytosol, peroxisome, plasma membrane	60.16	60.91
CDY22739	Canola	plasma membrane	63.41	57.35
GSMUA_Achr7P25670_001	Banana	plasma membrane	55.28	55.51
GSMUA_Achr4P21150_001	Banana	plasma membrane	52.85	53.28
GSMUA_Achr1P14120_001	Banana	plasma membrane	52.44	52.87
GSMUA_Achr1P27190_001	Banana	plasma membrane	52.03	52.24
GSMUA_Achr8P20500_001	Banana	plasma membrane	51.22	51.85
GSMUA_Achr9P10630_001	Banana	plasma membrane	45.53	46.09
GSMUA_Achr8P20490_001	Banana	peroxisome, plasma membrane, vacuole	43.5	43.85
CDY09067	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr10P01390_001	EnsemblPlants:GSMUA_Achr10T01390_001	EnsemblPlantsGene:GSMUA_Achr10G01390_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF31	PFAM:PF01027	SEG:seg	TMHMM:TMhelix
UniParc:UPI000294F9CA	UniProt:M0REG6	MapMan:35.1	:	:	:

Description

BI1-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G01390_001]

Coordinates

chr10:-:3380622..3386947

Molecular Weight (calculated)

26879.1 Da

IEP (calculated)

7.906

GRAVY (calculated)

0.687

Length

246 amino acids

Sequence
(BLAST)

001: MHGYERVEKG AAPGGDIEAG TLYPGLSRGD NELRWGFVRK VYGILAAQVL LTTAVSAATV LYRPVNAALA SSPGLALCLA FLPLFLLCPL YYYQQKHPLN
101: FLFLGLFTVC LSLSVGVACA NTQGRIVLEA LILTSAVVLS LTGYTFWASR KGKDFSYLGP IVFSGLMVLF LSTFIQIFFP LGPTSVAIFG GLGAVVFSAF
201: IVYDTDNLIK RYNYDEYIWA SVVLYLDILN LFLSIMNMLR GMQSDG

Best Arabidopsis Sequence Match ( AT4G15470.1 )
(BLAST)

001: MDKPYGYASV SMSGIDRSAG KDIDLEMGVG EATLYPGLSY GENQLRWGFI RKVYGILSAQ LLLTTLISAV VVLNPPVNDL LTGSPGILLF LCIVPFILIW
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN

Arabidopsis Description

LFG5BI1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94A20]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.