Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G051300.1 | Barley | endoplasmic reticulum, plasma membrane | 71.18 | 91.11 |
| HORVU3Hr1G105430.1 | Barley | plasma membrane | 69.79 | 82.04 |
| HORVU3Hr1G105460.2 | Barley | peroxisome, plasma membrane, plastid | 79.17 | 80.57 |
| Os07t0177300-01 | Rice | plasma membrane, plastid | 67.71 | 79.92 |
| EER98056 | Sorghum | plasma membrane | 67.71 | 78.63 |
| Zm00001d018938_P001 | Maize | plasma membrane | 68.4 | 75.19 |
| HORVU5Hr1G105760.4 | Barley | peroxisome, plasma membrane, vacuole | 60.76 | 71.43 |
| HORVU5Hr1G094490.1 | Barley | golgi, plasma membrane, vacuole | 59.03 | 68.27 |
| HORVU5Hr1G044320.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 17.71 | 66.23 |
| HORVU4Hr1G015460.1 | Barley | extracellular, plasma membrane | 20.49 | 62.77 |
| HORVU3Hr1G061070.4 | Barley | plasma membrane | 28.12 | 60.9 |
| HORVU5Hr1G037150.1 | Barley | golgi, plastid | 46.88 | 53.78 |
| HORVU1Hr1G061500.2 | Barley | peroxisome | 40.97 | 45.04 |
| HORVU3Hr1G104710.1 | Barley | extracellular, peroxisome, plastid | 29.86 | 34.68 |
| HORVU3Hr1G104660.1 | Barley | cytosol | 28.12 | 32.53 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G105470.3 | EnsemblPlantsGene:HORVU3Hr1G105470 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Bax_inhibitor_1-related |
| PANTHER:PTHR23291 | PANTHER:PTHR23291:SF48 | PFAM:PF01027 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B47D412 |
| UniProt:A0A287MJG9 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:668519282..668522233
Molecular Weight (calculated)
31639.4 Da
IEP (calculated)
8.989
GRAVY (calculated)
0.825
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: SHSHLICPYK LSTGAFSAHR RRLPSVRYTR ENPSIPPEAA SLLPATPGEM KGCDIEAAAP TGALYAGMAE SPELRWALIR KIYVILSLQL LLTAVVAAVV
101: VKVRAIPHFF VSSYAGLGLY IFLLILPFIV LCPLYLYRQK HPVNLLLLGV FTVSISFAVG MTCAFTSGKV ILEAAILTTV VVLSLTAYTF WAAGRGKDFS
201: FLGPFLFASL IMLLVFGFIQ ILFPLGKLSH MIYGALAALI FSAYIVYDTD NIIKRYTYDE YVWAAVSLYL DIINLFMALL TLFSAGDS
101: VKVRAIPHFF VSSYAGLGLY IFLLILPFIV LCPLYLYRQK HPVNLLLLGV FTVSISFAVG MTCAFTSGKV ILEAAILTTV VVLSLTAYTF WAAGRGKDFS
201: FLGPFLFASL IMLLVFGFIQ ILFPLGKLSH MIYGALAALI FSAYIVYDTD NIIKRYTYDE YVWAAVSLYL DIINLFMALL TLFSAGDS
001: MYKWNLPYRK DDVETGREGG ERSLYPTMLE SPELRWGFIR KVYSIIAFQL LATIAVASTV VFVRPIAVFF ATTSAGLALW IVLIITPLIV MCPLYYYHQK
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
101: HPVNYLLLGI FTVALAFAVG LTCAFTSGKV ILEAAILTTV VVLSLTVYTF WAAKKGYDFN FLGPFLFGAL IVLMVFALIQ IFFPLGRISV MIYGCLAAII
201: FCGYIVYDTD NLIKRYSYDE YIWAAVSLYL DIINLFLALL TIFRAAE
Arabidopsis Description
LFG4Protein LIFEGUARD 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.