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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000204.1-P
Bra000340.1-P
Bra000643.1-P
Bra001137.1-P
Bra001422.1-P
Bra001840.1-P
Bra002138.1-P
Bra002151.1-P
Bra003423.1-P
Bra003555.1-P
Bra003751.1-P
Bra004803.1-P
Bra005215.1-P
Bra005216.1-P
Bra005603.1-P
Bra005866.1-P
Bra006115.1-P
Bra006442.1-P
Bra007316.1-P
Bra007547.1-P
Bra007634.1-P
Bra008201.1-P
Bra008545.1-P
Bra008874.1-P
Bra008940.1-P
Bra009898.1-P
Bra010030.1-P
Bra010229.1-P
Bra010253.1-P
Bra010492.1-P
Bra010748.1-P
Bra011248.1-P
Bra011585.1-P
Bra012289.1-P
Bra013118.1-P
Bra013225.1-P
Bra013790.1-P
Bra014029.1-P
Bra014252.1-P
Bra014320.1-P
Bra014481.1-P
Bra014634.1-P
Bra015164.1-P
Bra015613.1-P
Bra015839.1-P
Bra016411.1-P
Bra016421.1-P
Bra016623.1-P
Bra017697.1-P
Bra017916.1-P
Bra017936.1-P
Bra018566.1-P
Bra018959.1-P
Bra019307.1-P
Bra019475.1-P
Bra019657.1-P
Bra020049.1-P
Bra020536.1-P
Bra021074.1-P
Bra023102.1-P
Bra023103.1-P
Bra023339.1-P
Bra023866.1-P
Bra023867.1-P
Bra024282.1-P
Bra025116.1-P
Bra025373.1-P
Bra026013.1-P
Bra026026.1-P
Bra026245.1-P
Bra026579.1-P
Bra026696.1-P
Bra026997.1-P
Bra027009.1-P
Bra027498.1-P
Bra027622.1-P
Bra028013.1-P
Bra029183.1-P
Bra030395.1-P
Bra030492.1-P
Bra030565.1-P
Bra030769.1-P
Bra031296.1-P
Bra031297.1-P
Bra032628.1-P
Bra032766.1-P
Bra032886.1-P
Bra033035.1-P
Bra033079.1-P
Bra033276.1-P
Bra033830.1-P
Bra034460.1-P
Bra034675.1-P
Bra034808.1-P
Bra035727.1-P
Bra036580.1-P
Bra036917.1-P
Bra036955.1-P
Bra037287.1-P
Bra037667.1-P
Bra037771.1-P
Bra038265.1-P
Bra038380.1-P
Bra039062.1-P
Bra039259.1-P
Bra039463.1-P
Bra039706.1-P
Bra039822.1-P
Bra039859.1-P
Bra040103.1-P
Bra040619.1-P
Bra041028.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G19030.1 Bra032628.1-P AT1G01230.1 21798944
AT4G19030.1 Bra033276.1-P AT1G01230.1 21798944
AT4G19030.1 Bra030565.1-P AT1G04340.1 21798944
AT4G19030.1 Bra018566.1-P AT1G09330.1 21798944
AT4G19030.1 Bra030769.1-P AT1G09330.1 21798944
AT4G19030.1 Bra019657.1-P AT1G14360.1 21798944
AT4G19030.1 Bra026026.1-P AT1G16790.1 21798944
AT4G19030.1 Bra016623.1-P AT1G16950.1 21798944
AT4G19030.1 Bra026013.1-P AT1G16950.1 21798944
AT4G19030.1 Bra026696.1-P AT1G16950.1 21798944
AT4G19030.1 Bra016421.1-P AT1G21460.1 21798944
AT4G19030.1 Bra017916.1-P AT1G21460.1 21798944
AT4G19030.1 Bra032886.1-P AT1G28250.1 21798944
AT4G19030.1 Bra028013.1-P AT1G33800.1 21798944
AT4G19030.1 Bra034460.1-P AT1G33800.1 21798944
AT4G19030.1 Bra036955.1-P AT1G44750.1 21798944
AT4G19030.1 Bra014029.1-P AT1G44800.1 21798944
AT4G19030.1 Bra040619.1-P AT1G44800.1 21798944
AT4G19030.1 Bra015613.1-P AT1G47530.1 21798944
AT4G19030.1 Bra014252.1-P AT1G50430.1 21798944
AT4G19030.1 Bra030492.1-P AT1G50430.1 21798944
AT4G19030.1 Bra041028.1-P AT1G50430.1 21798944
AT4G19030.1 Bra014320.1-P AT1G52280.1 21798944
AT4G19030.1 Bra018959.1-P AT1G52280.1 21798944
AT4G19030.1 Bra030395.1-P AT1G52280.1 21798944
AT4G19030.1 Bra027009.1-P AT1G62880.1 21798944
AT4G19030.1 Bra039259.1-P AT1G62880.1 21798944
AT4G19030.1 Bra026997.1-P AT1G63120.1 21798944
AT4G19030.1 Bra027622.1-P AT1G63120.1 21798944
AT4G19030.1 Bra003751.1-P AT1G75500.1 21798944
AT4G19030.1 Bra008201.1-P AT1G75500.1 21798944
AT4G19030.1 Bra015839.1-P AT1G75500.1 21798944
AT4G19030.1 Bra012289.1-P AT1G77350.1 21798944
AT4G19030.1 Bra016411.1-P AT1G77350.1 21798944
AT4G19030.1 Bra017936.1-P AT1G77350.1 21798944
AT4G19030.1 Bra003555.1-P AT1G80170.1 21798944
AT4G19030.1 Bra026579.1-P AT2G02810.1 21798944
AT4G19030.1 Bra025116.1-P AT2G03505.1 21798944
AT4G19030.1 Bra013118.1-P AT2G14835.2 21798944
AT4G19030.1 Bra039822.1-P AT2G14835.2 21798944
AT4G19030.1 Bra037287.1-P AT2G16800.1 21798944
AT4G19030.1 Bra005603.1-P AT2G32580.1 21798944
AT4G19030.1 Bra005215.1-P AT2G37180.1 21798944
AT4G19030.1 Bra005216.1-P AT2G37180.1 21798944
AT4G19030.1 Bra023102.1-P AT2G37180.1 21798944
AT4G19030.1 Bra023103.1-P AT2G37180.1 21798944
AT4G19030.1 Bra000204.1-P AT2G40765.1 21798944
AT4G19030.1 Bra000340.1-P AT2G44080.1 21798944
AT4G19030.1 Bra004803.1-P AT2G44080.1 21798944
AT4G19030.1 Bra037667.1-P AT2G44080.1 21798944
AT4G19030.1 Bra001137.1-P AT3G05100.1 21798944
AT4G19030.1 Bra039463.1-P AT3G05100.1 21798944
AT4G19030.1 Bra001422.1-P AT3G11820.1 21798944
AT4G19030.1 Bra034808.1-P AT3G11820.1 21798944
AT4G19030.1 Bra001840.1-P AT3G21690.1 21798944
AT4G19030.1 Bra023866.1-P AT3G21690.1 21798944
AT4G19030.1 Bra023867.1-P AT3G21690.1 21798944
AT4G19030.1 Bra031296.1-P AT3G21690.1 21798944
AT4G19030.1 Bra031297.1-P AT3G21690.1 21798944
AT4G19030.1 Bra013225.1-P AT3G25220.1 21798944
AT4G19030.1 Bra033035.1-P AT3G28050.1 21798944
AT4G19030.1 Bra039062.1-P AT3G28050.1 21798944
AT4G19030.1 Bra025373.1-P AT3G29034.1 21798944
AT4G19030.1 Bra033079.1-P AT3G29034.1 21798944
AT4G19030.1 Bra019475.1-P AT3G46060.1 21798944
AT4G19030.1 Bra033830.1-P AT3G46060.1 21798944
AT4G19030.1 Bra038265.1-P AT3G46060.1 21798944
AT4G19030.1 Bra007316.1-P AT3G57280.1 21798944
AT4G19030.1 Bra014634.1-P AT3G57280.1 21798944
AT4G19030.1 Bra003423.1-P AT3G60600.1 21798944
AT4G19030.1 Bra007547.1-P AT3G60600.1 21798944
AT4G19030.1 Bra014481.1-P AT3G60600.1 21798944
AT4G19030.1 Bra007634.1-P AT3G61870.1 21798944
AT4G19030.1 Bra008545.1-P AT4G01430.1 21798944
AT4G19030.1 Bra000643.1-P AT4G08230.1 21798944
AT4G19030.1 Bra038380.1-P AT4G09580.1 21798944
AT4G19030.1 Bra015164.1-P AT4G13500.1 21798944
AT4G19030.1 Bra010748.1-P AT4G14160.1 21798944
AT4G19030.1 Bra032766.1-P AT4G14160.1 21798944
AT4G19030.1 Bra039859.1-P AT4G14455.1 21798944
AT4G19030.1 Bra036917.1-P AT4G14950.1 21798944
AT4G19030.1 Bra039706.1-P AT4G14950.1 21798944
AT4G19030.1 Bra021074.1-P AT4G16980.1 21798944
AT4G19030.1 Bra040103.1-P AT4G16980.1 21798944
AT4G19030.1 Bra026245.1-P AT4G17340.1 21798944
AT4G19030.1 Bra019307.1-P AT4G23400.1 21798944
AT4G19030.1 Bra010492.1-P AT4G24310.1 21798944
AT4G19030.1 Bra013790.1-P AT4G24310.1 21798944
AT4G19030.1 Bra010253.1-P AT4G31130.1 21798944
AT4G19030.1 Bra011248.1-P AT4G31130.1 21798944
AT4G19030.1 Bra010229.1-P AT4G31600.1 21798944
AT4G19030.1 Bra011585.1-P AT4G35100.1 21798944
AT4G19030.1 Bra017697.1-P AT4G35100.1 21798944
AT4G19030.1 Bra034675.1-P AT4G35100.1 21798944
AT4G19030.1 Bra005866.1-P AT5G05760.1 21798944
AT4G19030.1 Bra006115.1-P AT5G11740.1 21798944
AT4G19030.1 Bra008940.1-P AT5G11740.1 21798944
AT4G19030.1 Bra023339.1-P AT5G11740.1 21798944
AT4G19030.1 Bra008874.1-P AT5G12880.1 21798944
AT4G19030.1 Bra002138.1-P AT5G18150.1 21798944
AT4G19030.1 Bra006442.1-P AT5G18150.1 21798944
AT4G19030.1 Bra002151.1-P AT5G18290.1 21798944
AT4G19030.1 Bra020049.1-P AT5G19570.1 21798944
AT4G19030.1 Bra009898.1-P AT5G26667.1 21798944
AT4G19030.1 Bra020536.1-P AT5G26667.1 21798944
AT4G19030.1 Bra036580.1-P AT5G26667.1 21798944
AT4G19030.1 Bra027498.1-P AT5G43460.1 21798944
AT4G19030.1 Bra010030.1-P AT5G49540.1 21798944
AT4G19030.1 Bra029183.1-P AT5G51150.1 21798944
AT4G19030.1 Bra035727.1-P AT5G51150.1 21798944
AT4G19030.1 Bra024282.1-P AT5G64290.1 21798944
AT4G19030.1 Bra037771.1-P AT5G64290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98596 Canola cytosol, peroxisome, plasma membrane 99.66 99.66
CDY01565 Canola cytosol, peroxisome, plasma membrane 99.33 99.33
Bra013361.1-P Field mustard cytosol, peroxisome, plasma membrane 93.62 93.94
AT4G18910.1 Thale cress golgi, peroxisome, vacuole 89.26 90.48
AT4G19030.1 Thale cress plasma membrane 80.54 81.08
KRH42926 Soybean plasma membrane 66.11 71.9
VIT_10s0003g01830.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 67.45 71.28
KRH59036 Soybean plasma membrane 64.43 71.11
KRH11076 Soybean cytosol 65.1 71.06
KRH21197 Soybean cytosol, peroxisome, plasma membrane 64.77 70.7
KRH59035 Soybean plasma membrane 63.42 69.74
PGSC0003DMT400071510 Potato plasma membrane 63.76 68.59
Solyc03g005980.2.1 Tomato plasma membrane 63.42 68.23
KRH42923 Soybean extracellular 60.4 66.42
Solyc02g071920.2.1 Tomato plasma membrane 64.09 65.86
PGSC0003DMT400073246 Potato plasma membrane 64.09 65.86
Bra025436.1-P Field mustard plastid 39.6 59.9
KRH45251 Soybean extracellular 17.79 58.24
Bra025435.1-P Field mustard plastid 30.87 56.1
Bra005428.1-P Field mustard extracellular, plasma membrane, plastid, vacuole 52.35 54.55
Bra005430.1-P Field mustard cytosol, plasma membrane, plastid, vacuole 51.68 53.66
Bra025437.1-P Field mustard plasma membrane 48.66 52.54
Bra028151.1-P Field mustard plasma membrane 48.99 51.59
Bra035520.1-P Field mustard plasma membrane 48.32 44.58
Bra035156.1-P Field mustard cytosol, peroxisome, plasma membrane 40.94 40.0
Bra033867.1-P Field mustard vacuole 44.97 39.76
Bra008442.1-P Field mustard cytosol, peroxisome, plasma membrane 40.6 39.67
Bra033181.1-P Field mustard plasma membrane 38.26 37.87
Bra000710.1-P Field mustard plasma membrane 37.92 37.54
HORVU7Hr1G088900.1 Barley cytosol, golgi, plasma membrane 24.16 34.12
Bra020777.1-P Field mustard plasma membrane 28.86 31.62
GSMUA_Achr4P10230_001 Banana plastid 19.46 18.47
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.1InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra012567EnsemblPlants:Bra012567.1
EnsemblPlants:Bra012567.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M4D7V7
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF189SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI00025403D2:
Description
AT4G18910 (E=7e-149) NIP1;2, NLM2 | NIP1;2 (NOD26-LIKE INTRINSIC PROTEIN 1;2); arsenite transmembrane transporter/ water channel
Coordinates
chrA03:+:23503140..23507627
Molecular Weight (calculated)
31695.7 Da
IEP (calculated)
8.589
GRAVY (calculated)
0.430
Length
298 amino acids
Sequence
(BLAST)
001: MAEISGNGHG DSKEGAVMVN INQEVELQQQ QKEAIHTTKS MKKQDSVLSF SVPFLQKLMA EILGTYFLIF AGCASVAVNA QHDKAVTLPG IAIVWGLTVM
101: VLVYSLGHIS GAHFNPAVTI AFASCGRFPL KQVPAYVISQ VIGSTLAAAT LRLLFGLDQD VCSGKHDVFV GTLPSGSDLQ SFVIEFIITF YLMFIISGVA
201: TDNRAIGELA GLAVGSTVLL NVIIAGPVSG ASMNPGRSLG PAMVYNCYKG IWIYIASPIL GAVAGAWVYN TVRYTDKPLR EITKSGSFLK SVRNGSSR
Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.