Factsheet for Bra032766.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12738	Canola	cytosol	88.99	93.34
Bra010748.1-P	Field mustard	cytosol	88.34	92.41
CDY01197	Canola	cytosol	90.41	91.6
AT4G14160.1	Thale cress	cytosol	87.18	87.06
VIT_05s0062g00130.t01	Wine grape	cytosol	81.99	82.1
Bra030613.1-P	Field mustard	cytosol	79.92	80.44
KRG97365	Soybean	cytosol, endoplasmic reticulum, nucleus	79.66	80.29
KRH31551	Soybean	endoplasmic reticulum	78.63	79.14
Os11t0433500-01	Rice	cytosol, plasma membrane	34.33	75.5
PGSC0003DMT400040714	Potato	cytosol	76.42	75.26
Solyc05g053830.2.1	Tomato	cytosol, nucleus, plastid	76.42	75.26
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	63.73	75.23
PGSC0003DMT400080958	Potato	cytosol	73.7	74.48
Solyc09g092680.2.1	Tomato	cytosol	73.32	73.89
GSMUA_Achr9P30270_001	Banana	plastid	66.32	72.62
GSMUA_Achr8P33210_001	Banana	cytosol	68.65	72.31
GSMUA_Achr1P25630_001	Banana	plastid	68.13	71.27
Zm00001d049155_P004	Maize	plastid	72.28	70.54
OQU83385	Sorghum	cytosol, plastid	72.41	70.49
TraesCS4B01G163100.3	Wheat	plastid	70.6	69.69
TraesCS4D01G151400.1	Wheat	golgi	70.6	69.69
TraesCS4A01G151800.3	Wheat	cytosol, plastid	70.34	69.08
GSMUA_Achr11P...	Banana	cytosol	19.17	67.58
HORVU4Hr1G041690.2	Barley	cytosol, nucleus	70.6	65.74
Zm00001d004639_P001	Maize	plastid	31.74	59.04
Bra031206.1-P	Field mustard	cytosol	55.57	57.12
Zm00001d004640_P001	Maize	cytosol, plastid	35.88	55.07
Bra005626.1-P	Field mustard	cytosol	7.9	52.59
Bra033691.1-P	Field mustard	cytosol	45.85	47.84
Bra021056.1-P	Field mustard	cytosol, nucleus, plastid	12.95	44.84
Bra036313.1-P	Field mustard	cytosol, plastid	15.41	13.4

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
InterPro:ADF-H/Gelsolin-like_dom_sf	EnsemblPlantsGene:Bra032766	EnsemblPlants:Bra032766.1	EnsemblPlants:Bra032766.1-P	ncoils:Coil	GO:GO:0000139
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0008270
GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114
InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	InterPro:IPR036465	UniProt:M4EVD3	PFAM:PF00626
PFAM:PF04810	PFAM:PF04811	PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF2
SUPFAM:SSF53300	SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23
InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	UniParc:UPI0002543A43
InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

AT4G14160 (E=0.0) | transport protein, putative

Coordinates

chrA04:-:4754331..4758822

Molecular Weight (calculated)

84844.3 Da

IEP (calculated)

5.315

GRAVY (calculated)

-0.072

Length

772 amino acids

Sequence
(BLAST)

001: MAEMDPEGMD GVRMTWNVWP RTKVEASKCV IPLAASISPI RRHSDIPSLP YAPLKCRTCV SVLTAFARVD FAAKIWICPF CFQRNPFPPH YHMISDTNLP
101: GELYPQYSTV EYALPSTAGQ FDPRTGAAPP LTPPPVFVFV LDTCMIEEEL GFAKSALKQA IGLLPENALV GFVSFGTQAH VHELGFSEMS KVFVFKGNKE
201: VSKDQVLDQL GLSSRRAPTS GFPKGAQNGL QSAAGVNRFL LPASDCEYTL DLLLDELQTD QWPVQPGHRP QRCTGVALSV AAGLLGACLP GTGARIVALV
301: GGPCTEGPGT IISKDLSDPV RSHKDLDKDA APYYKKAVKF YESIAKQLVA QGHVLDLFAS ALDQVGVAEM KVAVESTGGL VVLSESFGHS VFKDSFKRVF
401: EDGEQSLGLC FNGTLEINCS KDIKIQGAIG PCSSLEKKGP SVADTVIGEG NTNAWKLCGL DKSTCLTVFF DLSSTGSNAP GTVNPQFYLQ FVTSYQNPEG
501: QTLLRVTTIT RQWVDTAVST EELVQGFDQE TAAVVMARLA SFKMETEEGF DATRWLDRTL IRLCSKFGDY RKDDPTSFTL NPYFSLFPQF MFNLRRSQFV
601: QVFNNSPDET AYFRMLLNRE NISNATVMIQ PSLTSYTFSS PPQPALLDVA SIAADRILLL DAYFSVVVFH GMTIAQWRNM GYHEQPEHEA FAQLLQAPQE
701: DSQMIVRERF PVPRLVVCDQ HGSQARFLLA KLNPSATYNS ANEMSAGSDV IFTDDVSLQV FFEHLQKLAV QS

Best Arabidopsis Sequence Match ( AT4G14160.2 )
(BLAST)

001: MAEMADKAKV EEMDWEGIDG VRMTWNLWPR TKVEASKCVI PLAASISPIR RHPLILDLPY APLDCKTCKA LLNAFARVDF AAMNWVCPFC YHRNHFPSHY
101: HSISEINLPG ELYPQYTTVE YTLPPDPSRV PPPPVFVFVL DTCMIEEELG YAKSALKQAI GLLPENALVG FVSFGTQAHV HELGFSEMSK VFVFKGNKEV
201: TKDQILDQLG LGSSSRRAPT SGFSKGAQNG FQSSGVDRFL LPASECEYTL DLLLDELQSD QWPVQPGHRP QRCTGVALSV AAGLLGACLP GTGARIVALV
301: GGPCTEGPGT IISKDLSDPV RSHKDLDKDA APYYKKAVKF YDSIAKQLVA QGHVLDLFAS ALDQVGVAEM KVAVESTGGL VVLSESFGHS VFKDSFKRMF
401: EDGEHSLGLC FNGTLEINCS KDIKIQGVIG PCSSLEKKGP NVADTVIGEG NTSAWKLCGL DKSTCLTVFF DLSSTGSTAP GALNQQLYLQ FITRYQNSEG
501: KSLARVTTLT RQWVDTAVST ENLVQGFDQE TAAVVMARLT SLKMETEEGF DATRWLDRTL IRLCSKFGEY RKDDPTSFTL KPYLTLFPQF MFNLRRSQFV
601: QVFNNSPDET AYFRMLLNRE NISNAIVMIQ PSLTSYSFNS GPQAALLDVA SIAADKILLL DAYFSVVVFH GMTISQWRNM GYHHQPEHEA FAQLLQAPQE
701: DSQMLVRERF PVPRLVVCDQ HGSQARFLLA KLNPSATYNN ANEMSAGSDI IFTDDVSLQV FIEHLQKLAV QS

Arabidopsis Description

Sec23/Sec24 protein transport family protein [Source:UniProtKB/TrEMBL;Acc:F4JUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.