Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 1
- cytosol 2
- mitochondrion 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P19740_001 | Banana | cytosol, plastid | 22.41 | 31.33 |
| Bra010748.1-P | Field mustard | cytosol | 52.59 | 8.27 |
| Bra030613.1-P | Field mustard | cytosol | 53.45 | 8.08 |
| Bra032766.1-P | Field mustard | cytosol | 52.59 | 7.9 |
| Bra031206.1-P | Field mustard | cytosol | 43.1 | 6.66 |
| Bra033691.1-P | Field mustard | cytosol | 37.93 | 5.95 |
| Bra036313.1-P | Field mustard | cytosol, plastid | 13.79 | 1.8 |
| Bra021056.1-P | Field mustard | cytosol, nucleus, plastid | 1.72 | 0.9 |
Protein Annotations
| Gene3D:1.20.120.730 | MapMan:35.2 | EnsemblPlantsGene:Bra005626 | EnsemblPlants:Bra005626.1 | EnsemblPlants:Bra005626.1-P | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006888 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0030127 | InterPro:Gelsolin-like_dom_sf | UniProt:M4CN38 |
| PANTHER:PTHR11141 | PANTHER:PTHR11141:SF2 | SUPFAM:SSF81811 | SUPFAM:SSF82754 | InterPro:Sec23 | InterPro:Sec23/24_helical_dom_sf |
| UniParc:UPI00025477DE | : | : | : | : | : |
Description
AT1G05520 (E=6e-023) | transport protein, putative
Coordinates
chrA05:+:6603890..6604559
Molecular Weight (calculated)
12713.9 Da
IEP (calculated)
4.394
GRAVY (calculated)
-0.183
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCDDDTQVF NNSPDETAYS RMLLNRENIS NAAVMIQPSL TAYSFNSIPQ AALLDVSSIA SDRVCATIAR ASRGCADDRS WTFPMPRLVV CDQHGSQAGK
101: VFVSEAESFS KLQQCE
101: VFVSEAESFS KLQQCE
001: MSEMASMDPE GIDGVRMTWN VWPRTKVEAS KCVIPVAACI SPIRYHRDIP SVEYAPLRCR ICTAALNPFA RVDFLAKIWI CPICFQRNHF PPHYHVMSET
101: NVPCELYPQY TTVEYTLPNP SQPTGVGNFD QTGAVSGQPS PSVFVFVLDT CMIEEEFGYA KSALKQAIGL LPENALVGFV SFGTQAHVHE LGFSDLTKVY
201: VFRGDKEISK DQVLEQLGLG ASGRRNPVGG FPMGRDNSAN FGYSGVNRFL LPASDCEFTI DLLLEELQTD QWPVQAGRRQ SRCTGVAISV ATGLLGACFP
301: GTGARIVALI GGPCSEGPGT IVSKDLSEPL RSHKDLDKDA APFYKKAEKF YDALANQLVN QGHVLDLFAS ALDQVGVAEM KAAVERTGGL VVLSESFGHS
401: VFKDSFKRVF EDGEESLGLC FNGTLEICCS KDIKIQGIIG PCASLQKKGP SVADTVIGEG NTTQWKMCGL DKRTCLTVFF DLSSSDQSSA PGGVNNQLYL
501: QFMTSYQNSK GKTLQRVTTV TRQWVDTGLS TEELVQGFDQ ETAAVVVARL ASLKMETEEG FDATRWLDRN LIRLCSKFGD YRKDDPASFT LNPNFSLFPQ
601: FTFNLRRSQF VQVFNNSPDE TAYNRMLLNR ENISNAAVMI QPSLTTYSFN SLPQPALLDV ASIGADRILL LDSYISVVVF HGMTIAQWRN LGYQNQPEHQ
701: AFAQLLEAPQ EDAQMIIRDR FPVPRLVVCD QHGSQARFLL AKLNPSATYN NASEMNAGSD IIFTDDVSLQ VFFQHLQKLA VQS
101: NVPCELYPQY TTVEYTLPNP SQPTGVGNFD QTGAVSGQPS PSVFVFVLDT CMIEEEFGYA KSALKQAIGL LPENALVGFV SFGTQAHVHE LGFSDLTKVY
201: VFRGDKEISK DQVLEQLGLG ASGRRNPVGG FPMGRDNSAN FGYSGVNRFL LPASDCEFTI DLLLEELQTD QWPVQAGRRQ SRCTGVAISV ATGLLGACFP
301: GTGARIVALI GGPCSEGPGT IVSKDLSEPL RSHKDLDKDA APFYKKAEKF YDALANQLVN QGHVLDLFAS ALDQVGVAEM KAAVERTGGL VVLSESFGHS
401: VFKDSFKRVF EDGEESLGLC FNGTLEICCS KDIKIQGIIG PCASLQKKGP SVADTVIGEG NTTQWKMCGL DKRTCLTVFF DLSSSDQSSA PGGVNNQLYL
501: QFMTSYQNSK GKTLQRVTTV TRQWVDTGLS TEELVQGFDQ ETAAVVVARL ASLKMETEEG FDATRWLDRN LIRLCSKFGD YRKDDPASFT LNPNFSLFPQ
601: FTFNLRRSQF VQVFNNSPDE TAYNRMLLNR ENISNAAVMI QPSLTTYSFN SLPQPALLDV ASIGADRILL LDSYISVVVF HGMTIAQWRN LGYQNQPEHQ
701: AFAQLLEAPQ EDAQMIIRDR FPVPRLVVCD QHGSQARFLL AKLNPSATYN NASEMNAGSD IIFTDDVSLQ VFFQHLQKLA VQS
Arabidopsis Description
At1g05520/T25N20_16 [Source:UniProtKB/TrEMBL;Acc:Q8H0S3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.