Factsheet for Bra010748.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90271	Canola	cytosol	96.75	96.75
Bra032766.1-P	Field mustard	cytosol	92.41	88.34
AT4G14160.1	Thale cress	cytosol	85.37	81.5
Bra030613.1-P	Field mustard	cytosol	79.81	76.79
VIT_05s0062g00130.t01	Wine grape	cytosol	79.67	76.26
KRG97365	Soybean	cytosol, endoplasmic reticulum, nucleus	78.73	75.85
Os11t0433500-01	Rice	cytosol, plasma membrane	35.77	75.21
KRH31551	Soybean	endoplasmic reticulum	77.64	74.71
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	64.63	72.94
Solyc05g053830.2.1	Tomato	cytosol, nucleus, plastid	75.75	71.3
PGSC0003DMT400040714	Potato	cytosol	75.75	71.3
PGSC0003DMT400080958	Potato	cytosol	72.9	70.42
GSMUA_Achr9P30270_001	Banana	plastid	67.21	70.35
Solyc09g092680.2.1	Tomato	cytosol	72.63	69.97
GSMUA_Achr1P25630_001	Banana	plastid	68.97	68.97
GSMUA_Achr8P33210_001	Banana	cytosol	67.48	67.94
Zm00001d049155_P004	Maize	plastid	72.22	67.38
OQU83385	Sorghum	cytosol, plastid	72.22	67.21
GSMUA_Achr11P...	Banana	cytosol	19.92	67.12
TraesCS4B01G163100.3	Wheat	plastid	70.87	66.88
TraesCS4D01G151400.1	Wheat	golgi	70.87	66.88
TraesCS4A01G151800.3	Wheat	cytosol, plastid	70.6	66.28
HORVU4Hr1G041690.2	Barley	cytosol, nucleus	70.73	62.97
Zm00001d004640_P001	Maize	cytosol, plastid	36.99	54.27
Bra031206.1-P	Field mustard	cytosol	55.01	54.06
Zm00001d004639_P001	Maize	plastid	29.95	53.25
Bra005626.1-P	Field mustard	cytosol	8.27	52.59
Bra033691.1-P	Field mustard	cytosol	45.12	45.0
Bra021056.1-P	Field mustard	cytosol, nucleus, plastid	13.14	43.5
Bra036313.1-P	Field mustard	cytosol, plastid	15.99	13.29

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
InterPro:ADF-H/Gelsolin-like_dom_sf	EnsemblPlantsGene:Bra010748	EnsemblPlants:Bra010748.1	EnsemblPlants:Bra010748.1-P	GO:GO:0000139	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0008270	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom
InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	InterPro:IPR036465	UniProt:M4D2P5	PFAM:PF00626	PFAM:PF04810
PFAM:PF04811	PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF2	SUPFAM:SSF53300
SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom
InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	UniParc:UPI0002546D21	InterPro:Znf_Sec23_Sec24
InterPro:Znf_Sec23_Sec24_sf	SEG:seg	InterPro:vWFA_dom_sf	:	:	:

Description

AT4G14160 (E=4e-307) | transport protein, putative

Coordinates

chrA08:+:16241659..16246194

Molecular Weight (calculated)

81210.8 Da

IEP (calculated)

5.888

GRAVY (calculated)

-0.099

Length

738 amino acids

Sequence
(BLAST)

001: MAEMANMDPE GMDGVRMTWN VWPRTKVEAS KCVVPLAASI SPIRRHSDIP SLPYAPLKCR TCVAVLNAFA RVDFAAKIWI CPFCFQRNPF PPHYHMISET
101: NLPGELYPQY TTVEYAIPPA AAQFDPRSGA AGVPPQTPPP VFVFAHVHEL GFSEMSKVFV FRGNKEVSKD QVLDQLGLSS RRAPTSGFPK GAQNGFQSAS
201: GVNRFLLPAS DCEYTLDLLL DELQSDQWPV QPGHRSQRCT GVALSVAAGL LGACLPGTGA RIVALVGGPC TEGPGTIISK DLSEPVRSHK DLDKDAAPYY
301: KKAVKFYDSI AKQLVAQGHV LDLFASALDQ VGVAEMKVAV ESTGGLVVLS ESFGHSVFKD SFKRVFEDGE QSLGLCFNGS LEINCSKDIK IQGVIGPCSS
401: LEKKGPSVAD TVIGEGNTNA WKLCGLDKST CLTVFFDLSS TGSNAPGTVN PQFYLQFVTS YQNPEGQTLI RVTTITRQWV DTAVSTEELV QGFDQETAAV
501: VMARLASLKM ETEEGFDATR WLDRTLIRLC SKFGDYRKDD PSSFTLNPYF SLFPQFIFNL RRSQFVQVFN NSPDETAYFR MLLNRENISN ATVMIQPSLT
601: SYTFSSPPQP ALLDVASIAA DRILLLDAYF SVVVFHGMTI AQWRNMGYHH QAEHEAFAQL LQAPQEDSQM IVRERFPVPR LVVCDQHGSQ ARFLLAKLNP
701: SATYNNANEM SAGSDVIFTD DVSLQVFFEH LQKLAVQS

Best Arabidopsis Sequence Match ( AT4G14160.2 )
(BLAST)

001: MAEMADKAKV EEMDWEGIDG VRMTWNLWPR TKVEASKCVI PLAASISPIR RHPLILDLPY APLDCKTCKA LLNAFARVDF AAMNWVCPFC YHRNHFPSHY
101: HSISEINLPG ELYPQYTTVE YTLPPDPSRV PPPPVFVFVL DTCMIEEELG YAKSALKQAI GLLPENALVG FVSFGTQAHV HELGFSEMSK VFVFKGNKEV
201: TKDQILDQLG LGSSSRRAPT SGFSKGAQNG FQSSGVDRFL LPASECEYTL DLLLDELQSD QWPVQPGHRP QRCTGVALSV AAGLLGACLP GTGARIVALV
301: GGPCTEGPGT IISKDLSDPV RSHKDLDKDA APYYKKAVKF YDSIAKQLVA QGHVLDLFAS ALDQVGVAEM KVAVESTGGL VVLSESFGHS VFKDSFKRMF
401: EDGEHSLGLC FNGTLEINCS KDIKIQGVIG PCSSLEKKGP NVADTVIGEG NTSAWKLCGL DKSTCLTVFF DLSSTGSTAP GALNQQLYLQ FITRYQNSEG
501: KSLARVTTLT RQWVDTAVST ENLVQGFDQE TAAVVMARLT SLKMETEEGF DATRWLDRTL IRLCSKFGEY RKDDPTSFTL KPYLTLFPQF MFNLRRSQFV
601: QVFNNSPDET AYFRMLLNRE NISNAIVMIQ PSLTSYSFNS GPQAALLDVA SIAADKILLL DAYFSVVVFH GMTISQWRNM GYHHQPEHEA FAQLLQAPQE
701: DSQMLVRERF PVPRLVVCDQ HGSQARFLLA KLNPSATYNN ANEMSAGSDI IFTDDVSLQV FIEHLQKLAV QS

Arabidopsis Description

Sec23/Sec24 protein transport family protein [Source:UniProtKB/TrEMBL;Acc:F4JUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.