Factsheet for Bra036313.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22008	Canola	plastid	95.05	96.57
AT4G01810.2	Thale cress	plastid	89.86	90.68
KRG96600	Soybean	nucleus	72.07	73.48
VIT_07s0005g02630.t01	Wine grape	plastid	72.3	73.46
Solyc09g055810.1.1	Tomato	cytosol	6.53	73.42
KRH68337	Soybean	nucleus	71.51	72.9
Solyc01g080850.2.1	Tomato	plastid	71.73	72.8
GSMUA_Achr11P...	Banana	plastid	67.12	69.22
HORVU3Hr1G044780.1	Barley	cytosol	57.21	69.12
GSMUA_Achr6P20530_001	Banana	plastid	66.1	67.32
Zm00001d009150_P002	Maize	plastid	63.51	65.13
EES02883	Sorghum	cytosol, plastid	63.51	64.98
TraesCS3A01G195200.1	Wheat	plastid	61.49	64.54
TraesCS3D01G198500.1	Wheat	plastid	61.37	64.42
TraesCS3B01G222900.1	Wheat	plastid	60.92	63.95
Os01t0321700-01	Rice	cytosol, plastid	58.0	63.66
Solyc02g021380.1.1	Tomato	plastid	5.29	58.02
Solyc11g056380.1.1	Tomato	cytosol	9.01	52.29
Bra031206.1-P	Field mustard	cytosol	13.96	16.51
Bra033691.1-P	Field mustard	cytosol	13.4	16.08
Bra030613.1-P	Field mustard	cytosol	13.85	16.04
Bra010748.1-P	Field mustard	cytosol	13.29	15.99
Bra032766.1-P	Field mustard	cytosol	13.4	15.41
Bra005626.1-P	Field mustard	cytosol	1.8	13.79
Bra021056.1-P	Field mustard	cytosol, nucleus, plastid	2.14	8.52

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:3.40.20.10	Gene3D:3.40.50.410	MapMan:35.2	InterPro:ADF-H/Gelsolin-like_dom_sf
EnsemblPlantsGene:Bra036313	EnsemblPlants:Bra036313.1	EnsemblPlants:Bra036313.1-P	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005829
GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0007275	GO:GO:0008150	GO:GO:0008270
GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010584	GO:GO:0015031
GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0048658	GO:GO:0070971	InterPro:Gelsolin-like_dom
InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	InterPro:IPR036465	UniProt:M4F5F7	PFAM:PF00626	PFAM:PF04810
PFAM:PF04811	PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF6	SUPFAM:SSF53300
SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom
InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	UniParc:UPI000254206F	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

AT4G01810 (E=0.0) | protein transport protein-related

Coordinates

chrA09:+:487414..490382

Molecular Weight (calculated)

97112.0 Da

IEP (calculated)

6.836

GRAVY (calculated)

-0.221

Length

888 amino acids

Sequence
(BLAST)

001: MANVPHRSVN HPGTLTPLEP DRPSPPGTLT PLEPDSPPPQ PLSHSPSVVP SPTPPRYPQA PPSFRPDHMH SPNLLSPSNG IRTGSPIPRM STPPGPPVFN
101: TPVKPAAVPF RTSPATPQPM GYSSATASSL PVSTPSYYSN GSSTGSQRDL PDVVRMEEPI AADSPYVLFT ANKVLKQKKL ANVASLGFGA IVSAGREISP
201: GPQIIQRDPH RCLHCGAYSN PYTSILIGSG QWQCVICEKM NGSKGEYVAM SKDELRNYPE LSLPLVDYVQ TGNRRPGFVP ASDSRTSAPV VLVIDECLDE
301: PHLQHLQSSL HAFVDSLPQT TRLGIVVYGR TVSIYDFSEE SVASADVISG AKSPSAESMK SLIYGTGVYL SPMHASLKVA HEIFSSLRPY TLNVPEASRD
401: RCLGTAVEVA LAIIQGPSAE MFRGVVRRAG GNSRIIVCAG GPITYGPGSV PHSMSHPNYP YMEKTAIKWM ETLGREAHRH NTVVDILCAG TCPLRVPVLQ
501: PLAKTSGGVL VLHDDFGEAF GVDLQRAATR AAGSHGLLEV RCSDDIRITQ VIGPGEEAHS ETHETFKSDP AVCIQMLSVE ETQSFSISME NKRDIQGDHV
601: FFQFAFHYSD VYQADVSRVI TFKLPTVDSV SAYLQSVVDE AAAVLISKRT LLIAKTQKDA VDMRSTVDER IKDIALKFGS QVPKSKLYSF PKELSSLPEL
701: LFHLRRGPLL GNIIGSEDER SVLRNLFLNA SFDLSLRMVA PRCLMHQEGG TFEELPAYDL SMQSDKAVIL DHGTDVFIWL GAELSADEVK SAAVLAACRT
801: LAEELTEFRF PAPRILAFKE GSSQARYFVC RLIPAHKDPP YEQEARFPQV RRLTADQRRK LKSSFIEFDE ESFCEWMRSL KVVPPEPR

Best Arabidopsis Sequence Match ( AT4G01810.3 )
(BLAST)

001: MANLPKSSVN YPGTLTPLEP NRPSPQPDRT PVPHSPPVVA SPIPPRFPQP SFRPDQMSSP SMKSPSLLSP ANGIRTGSPI PRLSTPPGPP VFNTPVKPAA
101: VPFRTSPATP QPMAYSSANS SLPVSTPSFY SNGSSVGSQR DLPDVVRMEE PIAADSPYVL FSANKVLKQK KLANVASLGF GAIVSAGREI SPGPQIIQRD
201: PHRCLNCGAY SNPYSSILIG SGQWQCVICE NMNGSKGEYV ASSKNELQNF PELSLPLVDY VQTGNKRPGF VPASDSRTSA PVVLVIDECL DEPHLQHLQS
301: SLHAFVDSLP QTTRLGIILY GRTVSIYDFS EDSVASADVI SGAKSPSAES MKALIYGTGV YLSPMHASLK VAHEIFSSLR PYTLNVPEAS RDRCLGTAVE
401: AALAIIQGPS AEMSRGVVRR AGGNSRIIVC AGGPITYGPG SVPHSMSHPN YPYMEKTAIK WMENLGREAH RHNTVVDILC AGTCPLRVPI LQPLAKASGG
501: VLVLHDDFGE AFGVDLQRAA TRAAGSHGLL EVRCSDDILI TQVIGPGEEA HSETHETFKS DAALSIQMLS VEETQSFSLS MENKRDIKSD HVFFQFAFHY
601: SDVYQADVSR VITFKLPTVD SISAYLQSVE DEASAVLISK RTLLLAKNQK DAVDMRATVD ERIKDIALKF GSQVPKSKLY SFPKELSSLP ELLFHLRRGP
701: LLGNIIGHED ERSVLRNLFL NASFDLSLRM VAPRCLMHQE GGTFEELPAY DLSMQSDKAV ILDHGTDVFI WLGAELSADE VKSAAVLAAC RTLAEELTEF
801: RFPAPRILAF KEGSSQARYF VCRLIPAHKD PPYEQEARFP QIRTLTTEQR MKLKSSFIEF DEASFCEWMR SLKVVPPEPR

Arabidopsis Description

Sec23/Sec24 protein transport family protein [Source:UniProtKB/TrEMBL;Acc:Q84WV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.