Factsheet for HORVU3Hr1G044780.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G198500.1	Wheat	plastid	93.33	81.09
TraesCS3A01G195200.1	Wheat	plastid	92.93	80.73
TraesCS3B01G222900.1	Wheat	plastid	92.65	80.5
Zm00001d009150_P002	Maize	plastid	86.12	73.09
EES02883	Sorghum	cytosol, plastid	86.26	73.04
Os01t0321700-01	Rice	cytosol, plastid	78.78	71.57
Solyc09g055810.1.1	Tomato	cytosol	7.62	70.89
GSMUA_Achr11P...	Banana	plastid	76.05	64.92
GSMUA_Achr6P20530_001	Banana	plastid	75.1	63.3
KRH68337	Soybean	nucleus	73.06	61.65
KRG96600	Soybean	nucleus	72.93	61.54
VIT_07s0005g02630.t01	Wine grape	plastid	73.06	61.44
Solyc01g080850.2.1	Tomato	plastid	71.02	59.66
CDY22008	Canola	plastid	68.98	58.01
CDY07119	Canola	plastid	68.84	57.89
AT4G01810.2	Thale cress	plastid	69.25	57.84
Bra036313.1-P	Field mustard	cytosol, plastid	69.12	57.21
Solyc02g021380.1.1	Tomato	plastid	6.26	56.79
Solyc11g056380.1.1	Tomato	cytosol	10.61	50.98
HORVU4Hr1G014740.3	Barley	cytosol	17.28	16.69
HORVU5Hr1G068810.2	Barley	cytosol	16.73	16.14
HORVU4Hr1G041690.2	Barley	cytosol, nucleus	17.41	15.44
HORVU5Hr1G094210.8	Barley	cytosol, plastid	15.1	14.8

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:3.40.20.10	Gene3D:3.40.50.410	MapMan:35.2	UniProt:A0A287KXD6
InterPro:ADF-H/Gelsolin-like_dom_sf	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005829	GO:GO:0006810	GO:GO:0006886
GO:GO:0006888	GO:GO:0007275	GO:GO:0008150	GO:GO:0008270	GO:GO:0009653	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0010584	GO:GO:0015031	GO:GO:0016020	GO:GO:0016043
GO:GO:0030127	GO:GO:0048658	GO:GO:0070971	InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf	EnsemblPlantsGene:HORVU3Hr1G044780
EnsemblPlants:HORVU3Hr1G044780.1	InterPro:IPR029006	InterPro:IPR036465	PFAM:PF00626	PFAM:PF04810	PFAM:PF04811
PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF6	SUPFAM:SSF53300	SUPFAM:SSF81811
SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf
InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	UniParc:UPI000B47CAD5	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:290701943..290705697

Molecular Weight (calculated)

80878.0 Da

IEP (calculated)

6.584

GRAVY (calculated)

-0.079

Length

735 amino acids

Sequence
(BLAST)

001: TPGVQIYVDD DKEWNKWIRE VLKQKKLLNA PSLGFGALVS PGREVSPGPE ALERDPCRCL SCGAYVNLYC DVLIGSGQWQ CVICKKLNSS EGEFMVSSKQ
101: DLVQWPELVS SAVDYVHPGN RRSGLFPVSV SRVSGPIFVL IDECLDEAHL QHLQGSLHAF VDSLPPTARI GIISYGRTVS VYDFSEGAAV SADVLPGNKS
201: LTQESLKVLI YGTGVYLSPI HASLPVAHTI FSSLRPYQLS VAEVSRDRCL GAAVEVALGI IQGPSAELSR GIIKRSGGNC RILVCAGGPN TFGPGSTPYS
301: VQHPNYAYLE KTGMKYMESL GHEAQRHSTI VDILCAGTCP VRVPVLQPLA KCSGGVLLLH DDFGEAFGVN LQRASTKAAG SHGLFEIRCS DGMLVTQVIG
401: PGEEASPDSH ETFKHDTSFC IQMHIVEGTQ SFSVSMETKA DIKNEFVYFQ FAVRYSNMYQ TESTRVITSR LQTVDGLSAY LSSVQEDVAS VIIGKRTVLR
501: ARTASDALDM RLTIDERIKD IALKFGTQVP KSKLYRFPKE LSSLPECLFH LRRGPLLGSI IGHEDERSVL RSLFLNASFD LSLRMIAPRC IMHREGGTFE
601: ELPAYDLTMQ SNCAVVLDHG TDIFIWLGAE LATQEGQTAA ALAACRTLAE ELSELRFPAP RILSFREGSS QARYFVSRLI PAHKDPTYEQ ESRFPQLQTL
701: APELRTRLKS SFIHFDDPSF CEWMRSLRLV PPEPS

Best Arabidopsis Sequence Match ( AT4G01810.3 )
(BLAST)

001: MANLPKSSVN YPGTLTPLEP NRPSPQPDRT PVPHSPPVVA SPIPPRFPQP SFRPDQMSSP SMKSPSLLSP ANGIRTGSPI PRLSTPPGPP VFNTPVKPAA
101: VPFRTSPATP QPMAYSSANS SLPVSTPSFY SNGSSVGSQR DLPDVVRMEE PIAADSPYVL FSANKVLKQK KLANVASLGF GAIVSAGREI SPGPQIIQRD
201: PHRCLNCGAY SNPYSSILIG SGQWQCVICE NMNGSKGEYV ASSKNELQNF PELSLPLVDY VQTGNKRPGF VPASDSRTSA PVVLVIDECL DEPHLQHLQS
301: SLHAFVDSLP QTTRLGIILY GRTVSIYDFS EDSVASADVI SGAKSPSAES MKALIYGTGV YLSPMHASLK VAHEIFSSLR PYTLNVPEAS RDRCLGTAVE
401: AALAIIQGPS AEMSRGVVRR AGGNSRIIVC AGGPITYGPG SVPHSMSHPN YPYMEKTAIK WMENLGREAH RHNTVVDILC AGTCPLRVPI LQPLAKASGG
501: VLVLHDDFGE AFGVDLQRAA TRAAGSHGLL EVRCSDDILI TQVIGPGEEA HSETHETFKS DAALSIQMLS VEETQSFSLS MENKRDIKSD HVFFQFAFHY
601: SDVYQADVSR VITFKLPTVD SISAYLQSVE DEASAVLISK RTLLLAKNQK DAVDMRATVD ERIKDIALKF GSQVPKSKLY SFPKELSSLP ELLFHLRRGP
701: LLGNIIGHED ERSVLRNLFL NASFDLSLRM VAPRCLMHQE GGTFEELPAY DLSMQSDKAV ILDHGTDVFI WLGAELSADE VKSAAVLAAC RTLAEELTEF
801: RFPAPRILAF KEGSSQARYF VCRLIPAHKD PPYEQEARFP QIRTLTTEQR MKLKSSFIEF DEASFCEWMR SLKVVPPEPR

Arabidopsis Description

Sec23/Sec24 protein transport family protein [Source:UniProtKB/TrEMBL;Acc:Q84WV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.