CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22008	Canola	plastid	98.4	98.4
AT4G01810.2	Thale cress	plastid	90.85	90.23
KRG96600	Soybean	nucleus	73.0	73.25
KRH68337	Soybean	nucleus	72.54	72.79
VIT_07s0005g02630.t01	Wine grape	plastid	72.77	72.77
Solyc01g080850.2.1	Tomato	plastid	72.65	72.57
Solyc09g055810.1.1	Tomato	cytosol	6.52	72.15
GSMUA_Achr11P...	Banana	plastid	67.85	68.87
HORVU3Hr1G044780.1	Barley	cytosol	57.89	68.84
GSMUA_Achr6P20530_001	Banana	plastid	66.25	66.4
EES02883	Sorghum	cytosol, plastid	64.07	64.52
Zm00001d009150_P002	Maize	plastid	63.84	64.43
TraesCS3A01G195200.1	Wheat	plastid	61.9	63.95
TraesCS3D01G198500.1	Wheat	plastid	61.78	63.83
TraesCS3B01G222900.1	Wheat	plastid	61.33	63.36
Os01t0321700-01	Rice	cytosol, plastid	58.58	63.29
Solyc02g021380.1.1	Tomato	plastid	5.26	56.79
Solyc11g056380.1.1	Tomato	cytosol	9.15	52.29
CDY13800	Canola	cytosol	14.3	16.58
CDX94717	Canola	cytosol	13.73	15.96
CDY12077	Canola	cytosol	13.39	15.88
CDY22339	Canola	cytosol	13.39	15.81
CDY15544	Canola	cytosol	13.84	15.78
CDX90271	Canola	cytosol	13.27	15.72
CDX86574	Canola	cytosol	13.73	15.65
CDY12738	Canola	cytosol	13.16	15.62
CDY01197	Canola	cytosol	13.16	15.09
CDY64015	Canola	cytosol	2.17	13.67
CDY12241	Canola	cytosol	9.5	13.65
CDY59754	Canola	cytosol	14.53	13.41

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:3.40.20.10	Gene3D:3.40.50.410	MapMan:35.2	GO:A0A078F2H5
InterPro:ADF-H/Gelsolin-like_dom_sf	EnsemblPlants:CDY07119	ProteinID:CDY07119	ProteinID:CDY07119.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0006888	GO:GO:0008150	GO:GO:0008270	GO:GO:0016020	GO:GO:0030127	EnsemblPlantsGene:GSBRNA2T00123463001
InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	InterPro:IPR036465	PFAM:PF00626	PFAM:PF04810
PFAM:PF04811	PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF6	SUPFAM:SSF53300
SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom
InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	UniParc:UPI0004EE2A4C	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

BnaCnng01340D

Coordinates

chrLK031975:+:288032..291831

Molecular Weight (calculated)

95744.3 Da

IEP (calculated)

6.943

GRAVY (calculated)

-0.211

Length

874 amino acids

Sequence
(BLAST)

001: MANVPHRSVN HPGTLTPLEP DRPSPQPLSH SPSVVPSPTP PRYPQAPPSF RPDHMHSPNL LSPSNAIRTG SPIPRMSTPP GPPVFNTPVK PAAVPFRTSP
101: ATPQPMGYSS ATASSLPVST PSYYSNGSST GSQRDLPDVV RMEEPIAADS PYVLFSANKV LRQKKLANVA SLGFGAIVSA GREISPGPQI IQRDPHRCLH
201: CGAYSNPYTS ILIGSGQWQC VICEKMNGSK GEYVAMSKDE LRNYPELSLP LVDYVQTGNR RPGFVPASDS RTSAPVVLVI DECLDEPHLQ HLQSSLHAFV
301: DSLPQTTRLG IVVYGRTVSI YDFSEESVAS ADVISGAKSP SAESMKSLIY GTGVYLSPMH ASLKVAHEIF SSLRPYTLNV PEASRDRCLG TAVEAALAII
401: QGPSAEMSRG VVRRAGGNSR IIVCAGGPVT YGPGSVPHSM SHPNYPYMEK TAIKWMETLG REAHRHNTVV DILCAGTCPL RVPVLQPLAK TSGGVLVLHD
501: DFGEAFGVDL QRAATRAAGS HGLLEVRCSD DIRITQVIGP GEEAYSETYE TFKSDPAVCI QMLSVEETQS FSISMENKRD IQGDHVFFQF AFHYSDVYQA
601: DVSRVITFKL PTVDSVSAYL QSVVDEAAAV LISKRTLLIA KSQKDAVDMR ATVDERIKDI PLKFGSQVPK SKLYSFPKEL SCLPELLFHL RRGPLLGNII
701: GSEDERSVLR NLFLNASFDL SLRMVAPRCL MHQEGGTFEE LPAYDLSMQS DKAVILDHGT DVFIWLGAEL SADEVKSAAV LAACRTLAEE LTEFRFPAPR
801: ILAFKEGSSQ ARYFVCRLIP AHKDPPYEQE ARFPQVRRLT AEQRRKLKSS FIEFDEESFC EWMRSLRVVP PEPR

Best Arabidopsis Sequence Match ( AT4G01810.3 )
(BLAST)

001: MANLPKSSVN YPGTLTPLEP NRPSPQPDRT PVPHSPPVVA SPIPPRFPQP SFRPDQMSSP SMKSPSLLSP ANGIRTGSPI PRLSTPPGPP VFNTPVKPAA
101: VPFRTSPATP QPMAYSSANS SLPVSTPSFY SNGSSVGSQR DLPDVVRMEE PIAADSPYVL FSANKVLKQK KLANVASLGF GAIVSAGREI SPGPQIIQRD
201: PHRCLNCGAY SNPYSSILIG SGQWQCVICE NMNGSKGEYV ASSKNELQNF PELSLPLVDY VQTGNKRPGF VPASDSRTSA PVVLVIDECL DEPHLQHLQS
301: SLHAFVDSLP QTTRLGIILY GRTVSIYDFS EDSVASADVI SGAKSPSAES MKALIYGTGV YLSPMHASLK VAHEIFSSLR PYTLNVPEAS RDRCLGTAVE
401: AALAIIQGPS AEMSRGVVRR AGGNSRIIVC AGGPITYGPG SVPHSMSHPN YPYMEKTAIK WMENLGREAH RHNTVVDILC AGTCPLRVPI LQPLAKASGG
501: VLVLHDDFGE AFGVDLQRAA TRAAGSHGLL EVRCSDDILI TQVIGPGEEA HSETHETFKS DAALSIQMLS VEETQSFSLS MENKRDIKSD HVFFQFAFHY
601: SDVYQADVSR VITFKLPTVD SISAYLQSVE DEASAVLISK RTLLLAKNQK DAVDMRATVD ERIKDIALKF GSQVPKSKLY SFPKELSSLP ELLFHLRRGP
701: LLGNIIGHED ERSVLRNLFL NASFDLSLRM VAPRCLMHQE GGTFEELPAY DLSMQSDKAV ILDHGTDVFI WLGAELSADE VKSAAVLAAC RTLAEELTEF
801: RFPAPRILAF KEGSSQARYF VCRLIPAHKD PPYEQEARFP QIRTLTTEQR MKLKSSFIEF DEASFCEWMR SLKVVPPEPR

Arabidopsis Description

Sec23/Sec24 protein transport family protein [Source:UniProtKB/TrEMBL;Acc:Q84WV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.