CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031206.1-P	Field mustard	cytosol	76.66	96.67
CDY13800	Canola	cytosol	72.97	91.64
AT2G21630.1	Thale cress	cytosol	66.0	82.13
PGSC0003DMT400004550	Potato	cytosol	16.68	69.3
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	13.09	69.27
KRH07342	Soybean	cytosol	52.59	65.1
VIT_15s0045g00540.t01	Wine grape	cytosol	53.12	64.4
KRH66226	Soybean	cytosol, endoplasmic reticulum	52.06	64.28
OQU80636	Sorghum	cytosol	51.11	63.43
Solyc01g081070.2.1	Tomato	cytosol, nucleus	50.79	62.96
Os08t0474700-01	Rice	plasma membrane	50.69	62.91
Zm00001d005902_P001	Maize	cytosol	50.05	62.2
EER96867	Sorghum	cytosol	49.95	62.07
TraesCS5A01G241100.1	Wheat	nucleus	49.0	60.89
TraesCS4A01G230100.1	Wheat	cytosol	49.0	60.81
HORVU4Hr1G014740.3	Barley	cytosol	48.79	60.71
TraesCS4B01G085800.1	Wheat	cytosol	48.89	60.68
TraesCS6B01G307800.1	Wheat	cytosol	42.66	60.39
TraesCS5B01G239200.1	Wheat	cytosol	48.57	60.37
TraesCS4D01G083800.1	Wheat	cytosol	45.62	60.34
GSMUA_AchrUn_...	Banana	cytosol	34.42	59.93
HORVU5Hr1G068810.2	Barley	cytosol	48.15	59.84
CDY12738	Canola	cytosol	43.4	55.84
CDY12077	Canola	cytosol	43.4	55.77
CDX90271	Canola	cytosol	43.19	55.42
CDY01197	Canola	cytosol	43.51	54.07
CDX86574	Canola	cytosol	43.51	53.72
CDY15544	Canola	cytosol	43.29	53.45
Os09t0460200-00	Rice	plasma membrane	31.68	51.99
TraesCS5D01G247600.1	Wheat	cytosol, plastid	49.31	50.87
EER99932	Sorghum	cytosol	19.32	50.55
CDY12241	Canola	cytosol	30.41	47.37
CDY22339	Canola	cytosol	32.31	41.35
CDX94717	Canola	cytosol	32.73	41.22
CDY64015	Canola	cytosol	4.75	32.37
CDY07119	Canola	plastid	13.41	14.53
CDY22008	Canola	plastid	13.41	14.53

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
Gene3D:3.40.50.620	GO:A0A078J273	UniProt:A0A078J273	InterPro:ADF-H/Gelsolin-like_dom_sf	EnsemblPlants:CDY59754	ProteinID:CDY59754
ProteinID:CDY59754.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0006950	GO:GO:0008150
GO:GO:0008270	GO:GO:0015031	GO:GO:0016020	GO:GO:0030127	EnsemblPlantsGene:GSBRNA2T00027658001	InterPro:Gelsolin-like_dom
InterPro:Gelsolin-like_dom_sf	InterPro:IPR014729	InterPro:IPR029006	InterPro:IPR036465	PFAM:PF00582	PFAM:PF00626
PFAM:PF04810	PFAM:PF04811	PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF2
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF53300	SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754
SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S
UniParc:UPI0004EF334C	InterPro:UspA	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf	SEG:seg	InterPro:vWFA_dom_sf

Description

BnaC08g49290DBnaC08g49290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J273]

Coordinates

chrLK033803:+:8027..12873

Molecular Weight (calculated)

104384.0 Da

IEP (calculated)

5.956

GRAVY (calculated)

-0.033

Length

947 amino acids

Sequence
(BLAST)

001: MEPLMEDEEF SVREVVLPSL IPVVPEPELE REDGERRRGR DVIIAVDHGP NSKHAFDWAL VHFCRLADTI HLVHAVSSVK NDVVYETSQA LMEKLAVEAF
101: QVAMVKSVAR VVEGEAGKVI CKEAERLKPA AVIMGTRGRS LVRSVLQGSV SEYCFHNCKS APVIIVPGKE AGDESIAFDR TLSVRKSPIM AEFAGLESQD
201: GVRLPWNIIP VATTKDQPID SEIPVSAIYT PLAPSTPLLP YAPLRCRTCR SVLNPYSVVD FSASTWGCPF CFNRNPFPSN YSSISDTNLP PELFPRSTTV
301: EYLSSSSSSS PPPVFLFVVD TCLFSDELDF LRSSLSQALD LIPDASVVGL IAFDSLVRVY ELGFPHCTKS YFFHGNRDCS KDQLLDQLCF FVKSPKPSSG
401: VIAGVRDGLS AEDIARFLPP AADCQFTLHS VLEELGSSQW PAAPDHRPGR CTGVALRIAA CLLGACFPGS AARIMAFVGG PSTLGPGAIV SRELSEPIRS
501: HKDIGKDSAP CYQEAVEFYE KLAKQLVHQG HVLDVFASSV DQVGIAEMKV AVEQTGGFVV LAESFGHSVF RDSLKRVFQS GENDLGLSSC GIFEINCSKG
601: VKVQGIIGPC ASLEKKGPLC SDTGIGQGHT SAWKMCGLGK STSVCFVFEI AKRETADVVL QSQINQFYFQ FLTYTQMVKQ GSGLQLFQED GSWELKTYRQ
701: ELTNGFDQEA AAVVMARLIS FKMETQPEFN PQRWADKALV NLCSRFGEYQ KGNASSFNLP SQLSNFPQFV FHLRRSQFVQ VFNNSPDETA YFRMILNREN
801: VSNSVVMIQP WLVSFTFNSQ PEPIPLDVAS IAADRILLLD AYFTLVIFHG ATIAQWRKAG YHHQPEHQAL VHLLQSPRDY SDTIINERFP IPRLVICDQY
901: GSQARFLLAK LNPSSDGNGP FSGGSNVFTD DVSLSVFLDH LRRLIVH

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.