Factsheet for TraesCS4B01G085800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G307800.1	Wheat	cytosol	86.11	98.21
TraesCS4A01G230100.1	Wheat	cytosol	98.03	98.03
HORVU4Hr1G014740.3	Barley	cytosol	96.85	97.11
Os08t0474700-01	Rice	plasma membrane	87.68	87.68
OQU80636	Sorghum	cytosol	86.89	86.89
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	19.79	84.36
TraesCS5B01G239200.1	Wheat	cytosol	80.86	80.97
PGSC0003DMT400004550	Potato	cytosol	23.2	77.63
VIT_15s0045g00540.t01	Wine grape	cytosol	76.54	74.78
GSMUA_AchrUn_...	Banana	cytosol	52.69	73.9
Solyc01g081070.2.1	Tomato	cytosol, nucleus	73.53	73.43
KRH66226	Soybean	cytosol, endoplasmic reticulum	73.13	72.75
KRH07342	Soybean	cytosol	72.61	72.42
EER99932	Sorghum	cytosol	33.42	70.44
AT2G21630.1	Thale cress	cytosol	65.92	66.1
CDY13800	Canola	cytosol	62.12	62.86
Bra031206.1-P	Field mustard	cytosol	61.07	62.05
TraesCS4B01G163100.3	Wheat	plastid	62.52	61.0
CDY59754	Canola	cytosol	60.68	48.89
TraesCS5B01G386700.1	Wheat	cytosol	44.69	45.35
TraesCS3B01G222900.1	Wheat	plastid	16.51	14.89

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
InterPro:ADF-H/Gelsolin-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0008270
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom
InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	InterPro:IPR036465	PFAM:PF00626	PFAM:PF04810	PFAM:PF04811
PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF2	SUPFAM:SSF53300	SUPFAM:SSF81811
SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf
InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	EnsemblPlantsGene:TraesCS4B01G085800	EnsemblPlants:TraesCS4B01G085800.1	InterPro:Znf_Sec23_Sec24
InterPro:Znf_Sec23_Sec24_sf	TIGR:cd11287	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

No Description!

Coordinates

chr4B:-:86064930..86072678

Molecular Weight (calculated)

84136.1 Da

IEP (calculated)

5.425

GRAVY (calculated)

0.000

Length

763 amino acids

Sequence
(BLAST)

001: MSEFLELEAR DGVRMTWNVI PGTKQDAASC VVPVSAIYTP LNPNPAIPVL PYAPLRCRSC RSILNPFSVA DFSSKMWLCP FCFQRNHFPQ QYSAVSLSNL
101: PTELYPECCT VEYMATAETG PVLPPVFLFV VDTCMIEEEI GYLKSALAQA VELLPDQSLV GFITFGTYVQ VHELGFGLLP KSHVFKGTKE IKKDQILEQM
201: GFLTGKTKPT TGVITGARDG VSAESIARFL LPASECEFML NSLIEELQKD PWPVSADQRA SRCTGAALSV AASLLGICVP GSGGRIMAFI GGPSTEGPGS
301: IISKPLSDPI RSHKDLDKGS APLYNKAVKF YEEIGNQLVH QGHVLDLFAC ALDQVGVAEM KVAVERTGGI VVLAESFGHS VFKDSLRRIF QSSDSDLGLS
401: FNGIFEINCS KDVKIQGIIG PCTSLEKKGP LSSDTVVGQG NTSAWKMCGL DRKTSLCLLF DMAKKDAPDA IGQSQNNLFY FQFLTYYQHH DGQMRLRSTT
501: ISRRWVAGSG SVQELITGFD QEAAAAVMAR LVSFKMEAEV DFDPVRWLDR ALISLCSKFG DYQKEAPSSF SLSPRLSIFP QFIFNLRRSQ FIQVFNNSPD
601: ETAYFRMMLN RENVANAVVM IQPSLISYSF QSGPEPVLLD VSAIAGDRIL LLDSYFTVVI FHGITIAQWR KAGYQNQEGH EVFAQLLQAP QEEADSIIKE
701: RFPVPRLVVC DQYGSQARFL LAKLNPSVTY DSDHPPPPGG DMIFTDDASF QVFMEHLQRL AVQ

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.