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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13800 Canola cytosol 84.1 84.88
Bra031206.1-P Field mustard cytosol 82.52 83.62
PGSC0003DMT400004550 Potato cytosol 21.81 72.81
GSMUA_AchrUn_... Banana cytosol, mitochondrion 16.95 72.07
KRH07342 Soybean cytosol 69.65 69.28
VIT_15s0045g00540.t01 Wine grape cytosol 70.83 69.01
KRH66226 Soybean cytosol, endoplasmic reticulum 69.25 68.71
OQU80636 Sorghum cytosol 67.94 67.76
Solyc01g081070.2.1 Tomato cytosol, nucleus 67.67 67.41
Os08t0474700-01 Rice plasma membrane 67.28 67.1
TraesCS6B01G307800.1 Wheat cytosol 58.08 66.07
Zm00001d005902_P001 Maize cytosol 66.1 66.01
EER96867 Sorghum cytosol 66.1 66.01
CDY59754 Canola cytosol 82.13 66.0
TraesCS4B01G085800.1 Wheat cytosol 66.1 65.92
HORVU4Hr1G014740.3 Barley cytosol 65.83 65.83
TraesCS4D01G083800.1 Wheat cytosol 61.89 65.78
TraesCS4A01G230100.1 Wheat cytosol 65.83 65.66
GSMUA_AchrUn_... Banana cytosol 46.39 64.89
HORVU5Hr1G068810.2 Barley cytosol 63.86 63.78
TraesCS5A01G241100.1 Wheat nucleus 63.86 63.78
TraesCS5B01G239200.1 Wheat cytosol 63.73 63.65
Os09t0460200-00 Rice plasma membrane 42.05 55.46
AT4G14160.1 Thale cress cytosol 55.85 54.98
AT3G23660.2 Thale cress cytosol 57.03 54.87
AT1G05520.1 Thale cress cytosol 55.45 53.9
EER99932 Sorghum cytosol 25.36 53.31
TraesCS5D01G247600.1 Wheat cytosol, plastid 63.34 52.51
AT5G43670.1 Thale cress cytosol 43.36 41.56
AT4G01810.2 Thale cress plastid 17.35 15.0
Protein Annotations
Gene3D:1.20.120.730Gene3D:2.30.30.380Gene3D:2.60.40.1670MapMan:22.4.1.3.1Gene3D:3.40.20.10Gene3D:3.40.50.410
EntrezGene:816701UniProt:A0A178VR60ProteinID:AAD23642.1InterPro:ADF-H/Gelsolin-like_dom_sfProteinID:AEC07205.1ArrayExpress:AT2G21630
EnsemblPlantsGene:AT2G21630RefSeq:AT2G21630TAIR:AT2G21630RefSeq:AT2G21630-TAIR-GEnsemblPlants:AT2G21630.1TAIR:AT2G21630.1
EMBL:AY099755EMBL:BT010345GO:GO:0000139GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0006810GO:GO:0006886
GO:GO:0006888GO:GO:0008150GO:GO:0008270GO:GO:0009987GO:GO:0015031GO:GO:0016020
GO:GO:0016043GO:GO:0030127GO:GO:0090114InterPro:Gelsolin-like_domInterPro:Gelsolin-like_dom_sfInterPro:IPR029006
InterPro:IPR036465RefSeq:NP_179757.1ProteinID:OAP07543.1PFAM:PF00626PFAM:PF04810PFAM:PF04811
PFAM:PF04815PFAM:PF08033PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PANTHER:PTHR11141PANTHER:PTHR11141:SF2UniProt:Q9SIJ7SUPFAM:SSF53300
SUPFAM:SSF81811SUPFAM:SSF81995SUPFAM:SSF82754SUPFAM:SSF82919InterPro:Sec23InterPro:Sec23/24_helical_dom
InterPro:Sec23/24_helical_dom_sfInterPro:Sec23/24_trunk_domInterPro:Sec23_24_beta_SInterPro:Sec23_CUniParc:UPI000009F84EInterPro:Znf_Sec23_Sec24
InterPro:Znf_Sec23_Sec24_sfSEG:segInterPro:vWFA_dom_sf:::
Description
At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
Coordinates
chr2:+:9250298..9253915
Molecular Weight (calculated)
84603.8 Da
IEP (calculated)
6.036
GRAVY (calculated)
-0.034
Length
761 amino acids
Sequence
(BLAST)
001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.