Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033691.1-P | Field mustard | cytosol | 80.73 | 86.62 |
| CDY22339 | Canola | cytosol | 80.35 | 86.22 |
| CDX94717 | Canola | cytosol | 81.23 | 85.77 |
| GSMUA_Achr4P11140_001 | Banana | cytosol | 23.55 | 68.0 |
| Solyc03g005380.2.1 | Tomato | cytosol, golgi, plasma membrane | 63.1 | 64.4 |
| KRG97332 | Soybean | cytosol | 59.07 | 64.25 |
| Zm00001d013301_P002 | Maize | cytosol | 56.68 | 59.76 |
| TraesCS5D01G391900.1 | Wheat | cytosol | 56.42 | 59.57 |
| Os03t0742800-02 | Rice | cytosol | 56.55 | 59.31 |
| TraesCS5A01G382500.2 | Wheat | cytosol | 56.17 | 59.31 |
| EER93475 | Sorghum | cytosol | 56.17 | 59.23 |
| TraesCS5B01G386700.1 | Wheat | cytosol | 56.05 | 59.18 |
| PGSC0003DMT400034845 | Potato | cytosol | 17.88 | 57.72 |
| Zm00001d033975_P002 | Maize | cytosol | 55.29 | 55.99 |
| HORVU5Hr1G094210.8 | Barley | cytosol, plastid | 47.36 | 50.13 |
| VIT_05s0020g04710.t01 | Wine grape | plasma membrane | 66.88 | 46.87 |
| GSMUA_Achr4P11150_001 | Banana | cytosol | 22.8 | 46.17 |
| AT4G14160.1 | Thale cress | cytosol | 43.2 | 44.37 |
| AT3G23660.2 | Thale cress | cytosol | 43.7 | 43.87 |
| AT2G21630.1 | Thale cress | cytosol | 41.56 | 43.36 |
| AT1G05520.1 | Thale cress | cytosol | 42.44 | 43.04 |
| AT4G01810.2 | Thale cress | plastid | 15.37 | 13.86 |
Protein Annotations
| Gene3D:1.20.120.730 | MapMan:22.4.1.3.1 | Gene3D:3.40.20.10 | EntrezGene:834387 | InterPro:ADF-H/Gelsolin-like_dom_sf | ProteinID:AED94993.1 |
| ArrayExpress:AT5G43670 | EnsemblPlantsGene:AT5G43670 | RefSeq:AT5G43670 | TAIR:AT5G43670 | RefSeq:AT5G43670-TAIR-G | EnsemblPlants:AT5G43670.1 |
| TAIR:AT5G43670.1 | Unigene:At.7193 | EMBL:BT003332 | EMBL:BT010350 | GO:GO:0000139 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006888 | GO:GO:0008150 | GO:GO:0008270 | GO:GO:0009987 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030127 | GO:GO:0090114 | InterPro:Gelsolin-like_dom |
| InterPro:Gelsolin-like_dom_sf | InterPro:IPR029006 | InterPro:IPR036465 | RefSeq:NP_568626.1 | PFAM:PF00626 | PFAM:PF04810 |
| PFAM:PF04811 | PFAM:PF04815 | PFAM:PF08033 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11141 | PANTHER:PTHR11141:SF4 |
| UniProt:Q84WI4 | SUPFAM:SSF53300 | SUPFAM:SSF81811 | SUPFAM:SSF81995 | SUPFAM:SSF82754 | SUPFAM:SSF82919 |
| InterPro:Sec23 | InterPro:Sec23/24_helical_dom | InterPro:Sec23/24_helical_dom_sf | InterPro:Sec23/24_trunk_dom | InterPro:Sec23_24_beta_S | InterPro:Sec23_C |
| UniParc:UPI000000BFB9 | InterPro:Znf_Sec23_Sec24 | InterPro:Znf_Sec23_Sec24_sf | SEG:seg | InterPro:vWFA_dom_sf | : |
Description
At5g43670 [Source:UniProtKB/TrEMBL;Acc:Q84WI4]
Coordinates
chr5:-:17538723..17541990
Molecular Weight (calculated)
88783.0 Da
IEP (calculated)
6.242
GRAVY (calculated)
-0.087
Length
794 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLELEAIE GLRWSWNSWP TTKSDCESLV VPLSIMYTPL MHFSELPTIP YDPLICSRCG AVLNPYARVD YQSRIWSCPF CFHKNLFPRS YSGITETNLP
101: AELFPTYSAV EYSPLPSRQS GSNTTTPTAA ASWSNGFNQG VRSMPSNSSF SSLASSTVGG GGGVISELGP AFVFVVDASM VEDELRAVRS DVLFVIEQLP
201: ENCLVALITF DSMVRVYDLG FSECSKVVVF HGERDLSPDQ IQQFLGLGYS KQFHHGKMSA IRKQSFLLPL VECEFNLTSA FEEIIPLVDV KPGHRPHRST
301: GAAISTALGL LEGCSVTTGS RIMVFTSGPA TRGPGIIVDS DLSNSIRTHR DIITGHVSYY DKSCGFYKKL AKRLCDSSVV LDVFACSLDQ VGAAELRYAV
401: EMSGGFLLLG ETFESEQFKK CLRHIFIRDA DGNLSMYFDV SLEVVTTKDM RICGALGPVV SLRQKNDIVS ETEIGEGGTY MWKTSTVTNK TCVSFFFHVS
501: NEQNRKPQPG SAFFIQFITR YRYGNGAMRK RVTTVARRWV AGKSPEISSS FDQETAASVM ARLAINRAEE CHARDVITWL DNGLIRFASR FGDYIQEDPS
601: SFRLTPNFSL YPQFMFYLRR SQFLDVFNNS PDETGFFRLM LNREGVVNSI IMIQPTLLRY SFDGPPVPVL LDIRSVTPDV ILLFDSYFYV VIHHGSKIAQ
701: WRKLEYHKDP SHETFRNLLE APEIDAAQLV TDRIPMPRIV RCDQHGSQAR FLLAKLNPSV TQKTDHTGGS DIVLTDDMSL QDFLEDLQSL AVKG
101: AELFPTYSAV EYSPLPSRQS GSNTTTPTAA ASWSNGFNQG VRSMPSNSSF SSLASSTVGG GGGVISELGP AFVFVVDASM VEDELRAVRS DVLFVIEQLP
201: ENCLVALITF DSMVRVYDLG FSECSKVVVF HGERDLSPDQ IQQFLGLGYS KQFHHGKMSA IRKQSFLLPL VECEFNLTSA FEEIIPLVDV KPGHRPHRST
301: GAAISTALGL LEGCSVTTGS RIMVFTSGPA TRGPGIIVDS DLSNSIRTHR DIITGHVSYY DKSCGFYKKL AKRLCDSSVV LDVFACSLDQ VGAAELRYAV
401: EMSGGFLLLG ETFESEQFKK CLRHIFIRDA DGNLSMYFDV SLEVVTTKDM RICGALGPVV SLRQKNDIVS ETEIGEGGTY MWKTSTVTNK TCVSFFFHVS
501: NEQNRKPQPG SAFFIQFITR YRYGNGAMRK RVTTVARRWV AGKSPEISSS FDQETAASVM ARLAINRAEE CHARDVITWL DNGLIRFASR FGDYIQEDPS
601: SFRLTPNFSL YPQFMFYLRR SQFLDVFNNS PDETGFFRLM LNREGVVNSI IMIQPTLLRY SFDGPPVPVL LDIRSVTPDV ILLFDSYFYV VIHHGSKIAQ
701: WRKLEYHKDP SHETFRNLLE APEIDAAQLV TDRIPMPRIV RCDQHGSQAR FLLAKLNPSV TQKTDHTGGS DIVLTDDMSL QDFLEDLQSL AVKG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.